PDB entry 5xiu

View 5xiu on RCSB PDB site
Description: Crystal structure of RNF168 UDM2 in complex with Lys63-linked diubiquitin
Class: transferase/ribosomal protein
Keywords: ubiquitin, TRANSFERASE-RIBOSOMAL PROTEIN complex
Deposited on 2017-04-27, released 2018-03-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-03-21, with a file datestamp of 2018-03-16.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: E3 ubiquitin-protein ligase RNF168
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF168
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8IYW5 (5-48)
      • expression tag (2-4)
  • Chain 'B':
    Compound: Ubiquitin-40S ribosomal protein S27a
    Species: Mus musculus [TaxId:10090]
    Gene: Rps27a, Uba80, Ubcep1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5xiub_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5xiuB (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >5xiuB (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl