PDB entry 5xb2

View 5xb2 on RCSB PDB site
Description: ADP-Mg-F-dTMP bound Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
Class: transferase
Keywords: Kinase, Tranferase, Complex, Nucleotide Binding, TRANSFERASE
Deposited on 2017-03-15, released 2017-06-28
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-06-28, with a file datestamp of 2017-06-23.
Experiment type: XRAY
Resolution: 2.16 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: thymidylate kinase
    Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
    Gene: tmk, aq_969
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5xb2a_
  • Chain 'B':
    Compound: thymidylate kinase
    Species: Aquifex aeolicus (strain VF5) [TaxId:224324]
    Gene: tmk, aq_969
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5xb2b_
  • Heterogens: ADP, TMP, MG, F, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5xb2A (A:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvlrv

    Sequence, based on observed residues (ATOM records): (download) 
    >5xb2A (A:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvlr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5xb2B (B:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvlrv

    Sequence, based on observed residues (ATOM records): (download) 
    >5xb2B (B:)
mliafegidgsgkttqakklyeylkqkgyfvslyrepggtkvgevlreillteelderte
lllfeasrsklieekiipdlkrdkvvildrfvlstiayqgygkgldvefiknlnefatrg
vkpditllldipvdialrrlkeknrfenkeflekvrkgflelakeeenvvvidasgeeee
vfkeilralsgvlr