PDB entry 5wya

View 5wya on RCSB PDB site
Description: Structure of amino acid racemase, 2.65 A
Class: isomerase
Keywords: fold type I, PLP-dependent enzyme, ISOMERASE
Deposited on 2017-01-11, released 2017-04-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-05-17, with a file datestamp of 2017-05-12.
Experiment type: XRAY
Resolution: 2.65 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Isoleucine 2-epimerase
    Species: Lactobacillus buchneri [TaxId:1581]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wyaa_
  • Chain 'B':
    Compound: Isoleucine 2-epimerase
    Species: Lactobacillus buchneri [TaxId:1581]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wyab_
  • Chain 'C':
    Compound: Isoleucine 2-epimerase
    Species: Lactobacillus buchneri [TaxId:1581]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wyac_
  • Chain 'D':
    Compound: Isoleucine 2-epimerase
    Species: Lactobacillus buchneri [TaxId:1581]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5wyad_
  • Heterogens: 7VO, DMS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5wyaA (A:)
mgkldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvg
hthekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdand
aiikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyr
typgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfc
hehgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqs
ldapahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdv
rmwglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreql
dqalqvlddaftavengevtipkdtgkigw

    Sequence, based on observed residues (ATOM records): (download) 
    >5wyaA (A:)
kldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvght
hekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdandai
ikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyrty
pgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfche
hgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqsld
apahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdvrm
wglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreqldq
alqvlddaftavengevti

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5wyaB (B:)
mgkldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvg
hthekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdand
aiikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyr
typgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfc
hehgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqs
ldapahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdv
rmwglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreql
dqalqvlddaftavengevtipkdtgkigw

    Sequence, based on observed residues (ATOM records): (download) 
    >5wyaB (B:)
gkldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvgh
thekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdanda
iikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyrt
ypgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfch
ehgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqsl
dapahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdvr
mwglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreqld
qalqvlddaftavengevti

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5wyaC (C:)
mgkldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvg
hthekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdand
aiikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyr
typgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfc
hehgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqs
ldapahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdv
rmwglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreql
dqalqvlddaftavengevtipkdtgkigw

    Sequence, based on observed residues (ATOM records): (download) 
    >5wyaC (C:)
gkldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvgh
thekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdanda
iikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyrt
ypgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfch
ehgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqsl
dapahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdvr
mwglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreqld
qalqvlddaftavengevti

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5wyaD (D:)
mgkldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvg
hthekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdand
aiikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyr
typgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfc
hehgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqs
ldapahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdv
rmwglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreql
dqalqvlddaftavengevtipkdtgkigw

    Sequence, based on observed residues (ATOM records): (download) 
    >5wyaD (D:)
kldkasklideenkyyarsarinyynlvidhahgatlvdvdgnkyidllasasainvght
hekvvkaiadqaqklihytpayfhhvpgmelseklakiapgnspkmvsfgnsgsdandai
ikfaraytgrqyivsymgsyhgstygsqtlsgsslnmtrkigpmlpsvvhvpypdsyrty
pgetehdvslryfnefkkpfesflpadetacvliepiqgdggiikapeeymqlvykfche
hgilfaidevnqglgrtgkmwaiqqfkdiepdlmsvgkslasgmplsavigkkevmqsld
apahlfttagnpvcsaaslatldvieyeglveksatdgayakqrflemqqrhpmigdvrm
wglnggielvkdpktkepdsdaatkviyyafahgvviitlagnilrfqpplvipreqldq
alqvlddaftavengevti