PDB entry 5ww6

View 5ww6 on RCSB PDB site
Description: Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 240 iron atoms per dodecamer
Class: DNA binding protein
Keywords: ferritin-like fold, DNA binding, ferroxidation, OXIDOREDUCTASE, DNA BINDING PROTEIN
Deposited on 2016-12-31, released 2017-08-09
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-08-09, with a file datestamp of 2017-08-04.
Experiment type: XRAY
Resolution: 2.04 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative starvation-induced DNA protecting protein/Ferritin and Dps
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: MSMEG_3242, MSMEI_3159
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ww6a_
  • Chain 'B':
    Compound: Putative starvation-induced DNA protecting protein/Ferritin and Dps
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: MSMEG_3242, MSMEI_3159
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ww6b_
  • Chain 'C':
    Compound: Putative starvation-induced DNA protecting protein/Ferritin and Dps
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: MSMEG_3242, MSMEI_3159
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ww6c_
  • Chain 'D':
    Compound: Putative starvation-induced DNA protecting protein/Ferritin and Dps
    Species: Mycobacterium smegmatis str. MC2 155 [TaxId:246196]
    Gene: MSMEG_3242, MSMEI_3159
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5ww6d_
  • Heterogens: FE, FE2, MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5ww6A (A:)
msarrtesdiqgfhatpefggnlqkvlvdlielslqgkqahwnvvgsnfrdlhlqldelv
dfaregsdtiaermraldavpdgrsdtvaatttlpefpaferstadvvdlittrinatvd
tirrvhdavdaedpstadllhglidglekqawlirsenrkv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ww6B (B:)
msarrtesdiqgfhatpefggnlqkvlvdlielslqgkqahwnvvgsnfrdlhlqldelv
dfaregsdtiaermraldavpdgrsdtvaatttlpefpaferstadvvdlittrinatvd
tirrvhdavdaedpstadllhglidglekqawlirsenrkv

    Sequence, based on observed residues (ATOM records): (download) 
    >5ww6B (B:)
sarrtesdiqgfhatpefggnlqkvlvdlielslqgkqahwnvvgsnfrdlhlqldelvd
faregsdtiaermraldavpdgrsdtvaatttlpefpaferstadvvdlittrinatvdt
irrvhdavdaedpstadllhglidglekqawlirsenrkv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5ww6C (C:)
msarrtesdiqgfhatpefggnlqkvlvdlielslqgkqahwnvvgsnfrdlhlqldelv
dfaregsdtiaermraldavpdgrsdtvaatttlpefpaferstadvvdlittrinatvd
tirrvhdavdaedpstadllhglidglekqawlirsenrkv

    Sequence, based on observed residues (ATOM records): (download) 
    >5ww6C (C:)
sarrtesdiqgfhatpefggnlqkvlvdlielslqgkqahwnvvgsnfrdlhlqldelvd
faregsdtiaermraldavpdgrsdtvaatttlpefpaferstadvvdlittrinatvdt
irrvhdavdaedpstadllhglidglekqawlirsenrkv

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5ww6D (D:)
msarrtesdiqgfhatpefggnlqkvlvdlielslqgkqahwnvvgsnfrdlhlqldelv
dfaregsdtiaermraldavpdgrsdtvaatttlpefpaferstadvvdlittrinatvd
tirrvhdavdaedpstadllhglidglekqawlirsenrkv