PDB entry 5wkg
View 5wkg on RCSB PDB site
Description: Crystal Structure of Human CD1b in Complex with PA
Class: immune system
Keywords: antigen presenting molecule, PA, phospholipid, MHC, CD1b, IMMUNE SYSTEM
Deposited on
2017-07-25, released
2017-11-01
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 2.06 Å
R-factor: N/A
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: T-cell surface glycoprotein cd1b
Species: Homo sapiens [TaxId:9606]
Gene: CD1B
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5wkga1, d5wkga2, d5wkga3 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5wkgb_ - Heterogens: NAG, FUC, BMA, MAN, D21, CUY, PEG, CL, EDO, IOD, NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5wkgA (A:)
hafqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdk
evaeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggl
dflsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadl
qrqvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanw
twylratldvadgeaaglscrvkhsslegqdiilywrgsglndifeaqkiewhehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5wkgA (A:)
fqgptsfhviqtssftnstwaqtqgsgwlddlqihgwdsdsgtaiflkpwskgnfsdkev
aeleeifrvyifgfarevqdfagdfqmkypfeiqgiagcelhsggaivsflrgalggldf
lsvknascvpspeggsraqkfcaliiqyqgimetvrillyetcpryllgvlnagkadlqr
qvkpeawlssgpspgpgrlqlvchvsgfypkpvwvmwmrgeqeqqgtqlgdilpnanwtw
ylratldvadgeaaglscrvkhsslegqdiilywrgsgln
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5wkgB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>5wkgB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdr