PDB entry 5w41
View 5w41 on RCSB PDB site
Description: Zika MR766 NLS in complex with Importin alpha subunit-1
Class: viral protein/protein binding
Keywords: Zika, Nuclear Transport, Importin, Karyopherin, Virus, MR766, viral protein-protein binding complex
Deposited on
2017-06-08, released
2018-06-13
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-03-20, with a file datestamp of
2019-03-15.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Importin subunit alpha-1
Species: Mus musculus [TaxId:10090]
Gene: Kpna2, Rch1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5w41a_ - Chain 'B':
Compound: zika mr766 nls
Species: Zika virus (strain Mr 766) [TaxId:64320]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5w41A (A:)
mhhhhhhssglvprgsgmletaaalfernhmdspdlgtddddlamadigsnqgtvnwsve
divkginsnnlesqlqatqaarkllsrekqppidniiraglipkfvsflgktdcspiqfe
sawaltniasgtseqtkavvdggaipafisllasphahiseqavwalgniagdgsafrdl
vikhgaidpllallavpdlstlacgylrnltwtlsnlcrnknpappldaveqilptlvrl
lhhndpevladscwaisyltdgpneriemvvkkgvvpqlvkllgatelpivtpalraign
ivtgtdeqtqkvidagalavfpslltnpktniqkeatwtmsnitagrqdqiqqvvnhglv
pflvgvlskadfktqkeaawaitnytsggtveqivylvhcgiieplmnllsakdtkiiqv
ildaisnifqaaeklgeteklsimieecggldkiealqrhenesvykaslnliekyfsve
eeedqnvvpettsegfafqvqdgapgtfnf
Sequence, based on observed residues (ATOM records): (download)
>5w41A (A:)
gtvnwsvedivkginsnnlesqlqatqaarkllsrekqppidniiraglipkfvsflgkt
dcspiqfesawaltniasgtseqtkavvdggaipafisllasphahiseqavwalgniag
dgsafrdlvikhgaidpllallavpdlstlacgylrnltwtlsnlcrnknpappldaveq
ilptlvrllhhndpevladscwaisyltdgpneriemvvkkgvvpqlvkllgatelpivt
palraignivtgtdeqtqkvidagalavfpslltnpktniqkeatwtmsnitagrqdqiq
qvvnhglvpflvgvlskadfktqkeaawaitnytsggtveqivylvhcgiieplmnllsa
kdtkiiqvildaisnifqaaeklgeteklsimieecggldkiealqrhenesvykaslnl
iekyfs
- Chain 'B':
No sequence available.