PDB entry 5vtp

View 5vtp on RCSB PDB site
Description: X-ray diffraction data of DNA Polymerase Eta (RAD30) of Saccharomyces cerevisiae with a single magnesium bound in absence of DNA and incoming dNTP
Class: transferase
Keywords: Rad30, DNA Polymerase Eta, DNA Transferase, Catalytic Domain, TRANSFERASE
Deposited on 2017-05-17, released 2018-01-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA Polymerase ETA
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: RAD30, DBH1, YDR419W
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q04049 (7-End)
      • expression tag (6)
    Domains in SCOPe 2.08: d5vtpa1, d5vtpa2, d5vtpa3
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5vtpA (A:)
    mhhhhhhmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvc
    vqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvq
    dpakqisvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdn
    eyeltgdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdw
    ddvilalgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclld
    fldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqs
    dydrstsnidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdci
    swlevfcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshel
    lkvgikfvtdldikgknksyypltklsmtitnfdiidlqktvvdmfgnqvhtfks
    

    Sequence, based on observed residues (ATOM records): (download)
    >5vtpA (A:)
    hmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsi
    iavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqi
    svedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltg
    dlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvila
    lgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgk
    feitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrst
    snidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswlevf
    caeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgik
    fvtdldikgknksyypltklsmtitnfdii