PDB entry 5vn7

View 5vn7 on RCSB PDB site
Description: Structure of bacteriorhodopsin from crystals grown at 20 deg Celcius using GlyNCOC15+4 as an LCP host lipid
Class: membrane protein
Keywords: Membrane protein, 7TM, retinal protein
Deposited on 2017-04-28, released 2017-07-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: bacteriorhodopsin
    Species: Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) [TaxId:64091]
    Gene: bop, VNG_1467G
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vn7a_
  • Chain 'B':
    Compound: bacteriorhodopsin
    Species: Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) [TaxId:64091]
    Gene: bop, VNG_1467G
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vn7b_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vn7A (A:)
mlellptavegvsqaqitgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaitt
lvpaiaftmylsmllgygltmvpfggeqnpiywaryadwlfttplllldlallvdadqgt
ilalvgadgimigtglvgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpev
astfkvlrnvtvvlwsaypvvwligsegagivplnietllfmvldvsakvgfglillrsr
aifgeaeapepsagdgaaatsd

    Sequence, based on observed residues (ATOM records): (download) 
    >5vn7A (A:)
grpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsmllgyg
ltmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimigtglvg
altkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvvlwsay
pvvwligsegagivplnietllfmvldvsakvgfglillrsraif

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vn7B (B:)
mlellptavegvsqaqitgrpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaitt
lvpaiaftmylsmllgygltmvpfggeqnpiywaryadwlfttplllldlallvdadqgt
ilalvgadgimigtglvgaltkvysyrfvwwaistaamlyilyvlffgftskaesmrpev
astfkvlrnvtvvlwsaypvvwligsegagivplnietllfmvldvsakvgfglillrsr
aifgeaeapepsagdgaaatsd

    Sequence, based on observed residues (ATOM records): (download) 
    >5vn7B (B:)
rpewiwlalgtalmglgtlyflvkgmgvsdpdakkfyaittlvpaiaftmylsmllgygl
tmvpfggeqnpiywaryadwlfttplllldlallvdadqgtilalvgadgimigtglvga
ltkvysyrfvwwaistaamlyilyvlffgftskaesmrpevastfkvlrnvtvvlwsayp
vvwligsegagivplnietllfmvldvsakvgfglillrsraifgeaea