PDB entry 5vmb

View 5vmb on RCSB PDB site
Description: Crystal structure of a glycine hydroxymethyltransferase from Acinetobacter baumannii
Class: transferase
Keywords: NIAID, THF, serine production, protein production, essentiallity screen, structural genomics, Seattle Structural Genomics Center for Infectious Disease, SSGCID, TRANSFERASE
Deposited on 2017-04-27, released 2017-05-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-05-10, with a file datestamp of 2017-05-05.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: serine hydroxymethyltransferase
    Species: ACINETOBACTER BAUMANNII [TaxId:470]
    Gene: glyA, glyA2, A7M79_08275, A7M90_04720, A7N09_12635, A8A08_14715, A8G88_00905, AB895_0334, AB988_4249, ABUW_1333, APD06_10955, AZE33_14190, BGC29_02480, IX87_07645, LV38_04033
    Database cross-references and differences (RAF-indexed):
    • Uniprot V5VBJ2 (8-424)
      • expression tag (5-7)
    Domains in SCOPe 2.08: d5vmba1, d5vmba2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5vmbA (A:)
    mahhhhhhmfanisisefdpelaqaiasederqeahieliasenycspavmeaqgskltn
    kyaegypgkryyggcefvdvieqmaidrakelfgadyanvqphagsqansavylallnpg
    dtvlgmslahgghlthgakvsfsgktynavqyglnaetgeidyeeverlalehkprmiva
    gfsaysrvvdwqrfrdiadkvgaylfvdmahvaglvaagvypnpvqiadvttttthktlr
    gprsglilakaneeiekklqsavfpgnqggplmhaiaakaicfkeamsddfkayqqqvvk
    naqamaevfiargydvvsggtdnhlfllslikqdvtgkdadawlgaahitvnknsvpndp
    rspfvtsgirigtpavttrgfgeaevrelagwiadvidskgdekviadvkakveavcakf
    pvyak
    

    Sequence, based on observed residues (ATOM records): (download)
    >5vmbA (A:)
    hhhmfanisisefdpelaqaiasederqeahieliasenycspavmeaqgskltnkyaeg
    ypgkryyggcefvdvieqmaidrakelfgadyanvqphagsqansavylallnpgdtvlg
    msynavqyglnaetgeidyeeverlalehkprmivagfsaysrvvdwqrfrdiadkvgay
    lfvdmahvaglvaagvypnpvqiadvttttthktlrgprsglilakaneeiekklqsavf
    pgnqggplmhaiaakaicfkeamsddfkayqqqvvknaqamaevfiargydvvsggtdnh
    lfllslikqdvtgkdadawlgaahitvnknsvpndprspfvtsgirigtpavttrgfgea
    evrelagwiadvidskgdekviadvkakveavcakfpvyak