PDB entry 5vey

View 5vey on RCSB PDB site
Description: Solution NMR structure of histone H2A-H2B mono-ubiquitylated at H2A Lys15 in complex with RNF169 (653-708)
Class: transferase, structural protein, signaling protein
Keywords: Nucleosome, Ubiquitin, Ubiquitin ligase, Complex, TRANSFERASE, STRUCTURAL PROTEIN, SIGNALING PROTEIN
Deposited on 2017-04-06, released 2017-05-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-05-17, with a file datestamp of 2017-05-12.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.08 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone H2B type 1-J,Histone H2A type 1-B/E
    Species: Homo sapiens [TaxId:9606]
    Gene: HIST1H2AB, H2AFM, HIST1H2AE, H2AFA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P06899 (8-98)
      • linker (99)
    • Uniprot P04908 (100-193)
      • linker (101)
  • Chain 'B':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5veyb_
  • Chain 'C':
    Compound: E3 ubiquitin-protein ligase RNF169
    Species: Homo sapiens [TaxId:9606]
    Gene: RNF169, KIAA1991
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8NCN4 (3-58)
      • expression tag (0-2)

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5veyB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'C':
    No sequence available.