PDB entry 5v95

View 5v95 on RCSB PDB site
Description: Structure of the H477R variant of rat cytosolic PEPCK in complex with manganese.
Class: lyase
Keywords: phosphoenolpyruvate carboxykinase, LYASE
Deposited on 2017-03-23, released 2017-04-12
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-04-12, with a file datestamp of 2017-04-07.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P07379 (Start-621)
      • engineered mutation (476)
    Domains in SCOPe 2.06: d5v95a1, d5v95a2
  • Heterogens: MN, NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5v95A (A:)
    mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
    qeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmsee
    dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
    lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
    lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
    pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
    aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
    espegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimrdpf
    amrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewm
    fgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqv
    nadlpyeierelralkqrisqm
    

    Sequence, based on observed residues (ATOM records): (download)
    >5v95A (A:)
    dfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqeegvirkl
    kkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedfekafnar
    fpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvlealgdgef
    ikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgkkcfalr
    iasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecvg
    ddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggvy
    wegideplapgvtitswknkewrpepcahpnsrfctpasqcpiidpawespegvpiegii
    fggrrpagvplvyealswqhgvfvgaamrsmrdpfamrpffgynfgkylahwlsmahrpa
    aklpkifhvnwfrkflwpgfgensrvlewmfgriegedsakltpigyvpkedalnlkglg
    dvnveelfgiskefwekeveeidkyledqvnadlpyeierelralkqrisqm