PDB entry 5v1z
View 5v1z on RCSB PDB site
Description: Crystal structure of the RPN13 PRU-RPN2 (932-953)-ubiquitin complex
Class: protein binding
Keywords: RPN13, proteasome, RPN2, ubiquitin, PROTEIN BINDING
Deposited on
2017-03-02, released
2017-05-03
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-12-04, with a file datestamp of
2019-11-29.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Proteasomal ubiquitin receptor ADRM1
Species: Homo sapiens [TaxId:9606]
Gene: Adrm1, Gp110
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Proteasomal ubiquitin receptor ADRM1
Species: Homo sapiens [TaxId:9606]
Gene: Adrm1, Gp110
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: UBB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5v1zc_ - Chain 'D':
Compound: Ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: UBB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5v1zd_ - Chain 'E':
Compound: 26S proteasome non-ATPase regulatory subunit 1
Species: Homo sapiens [TaxId:9606]
Gene: PSMD1
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: 26S proteasome non-ATPase regulatory subunit 1
Species: Homo sapiens [TaxId:9606]
Gene: PSMD1
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5v1zC (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>5v1zC (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5v1zD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>5v1zD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.