SCOPe 2.06: Structural Classification of Proteins

PDB entry 5tma

View 5tma on RCSB PDB site
Description: Zymomonas mobilis pyruvate decarboxylase mutant PDC-2.3
Class: cell adhesion
Keywords: pyruvate decarboxylase, PDC, mutant, engineered, thermostable, CELL ADHESION
Deposited on 2016-10-12, released 2017-10-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 1.67 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: pyruvate decarboxylase
Species: Zymomonas mobilis [TaxId:542]
Gene: pdc, ZMO1360
Database cross-references and differences (RAF-indexed):
- Uniprot P06672 (0-End)
  - engineered mutation (1)
  - engineered mutation (37)
  - engineered mutation (108)
  - engineered mutation (206)
  - engineered mutation (223)
  - engineered mutation (332)
  - engineered mutation (356)
  - engineered mutation (373)
  - engineered mutation (375)
  - engineered mutation (490)
  - engineered mutation (514-515)
  - engineered mutation (518)
  - engineered mutation (526)
  - engineered mutation (539)
  - engineered mutation (552)
Domains in SCOPe 2.06: d5tmaa1, d5tmaa2, d5tmaa3
Chain 'B':
Compound: pyruvate decarboxylase
Species: Zymomonas mobilis [TaxId:542]
Gene: pdc, ZMO1360
Database cross-references and differences (RAF-indexed):
- Uniprot P06672 (0-End)
  - engineered mutation (1)
  - engineered mutation (37)
  - engineered mutation (108)
  - engineered mutation (206)
  - engineered mutation (223)
  - engineered mutation (332)
  - engineered mutation (356)
  - engineered mutation (373)
  - engineered mutation (375)
  - engineered mutation (490)
  - engineered mutation (514-515)
  - engineered mutation (518)
  - engineered mutation (526)
  - engineered mutation (539)
  - engineered mutation (552)
Domains in SCOPe 2.06: d5tmab1, d5tmab2, d5tmab3
Heterogens: TPP, MG, SO4, EDO, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>5tmaA (A:)
mdytvgtylaerlvqiglkhhfavagdynlvlldnlldnknmeqvyccnelncgfsaegy
arakgaaaavvtysvgalsafdaiggayaenlpvilisgapnnndhaaahvlhhalgktd
yhyqlemaknitaaaeaiytpeeapakidhviktalrekkpvyleiacniasmpcaapgp
asalfndeasdeaslnaaveetlkfienrdkvavlvgsklraaaaeeaavkfadalggav
atmaaaksffpeenphyigtswgevsypgvektmkeadavialapvfndysttgwtdipd
pkklvlaeprsvvvngirfpsvhlkdyltrlaekvskktgaldffkslnagelkkadpad
psaplvnaeiarqiedlltpnttviaetgdswfnaqrmklpngarveyemqwghigwsvp
aafgyavgaperrnilmvgdgsfqltaqevaqmvrlklpviiflinnygytievmihdgp
ynniknwdyaalmevfngnggydsgagkglkaktaaeleeaikvaldntdgptliecfia
redcteelvkwgervaaansrkpvnklllehhhhhh

Sequence, based on observed residues (ATOM records): (download)

>5tmaA (A:)
mdytvgtylaerlvqiglkhhfavagdynlvlldnlldnknmeqvyccnelncgfsaegy
arakgaaaavvtysvgalsafdaiggayaenlpvilisgapnnndhaaahvlhhalgktd
yhyqlemaknitaaaeaiytpeeapakidhviktalrekkpvyleiacniasmpcaapgp
asalfndeasdeaslnaaveetlkfienrdkvavlvgsklraaaaeeaavkfadalggav
atmaaaksffpeenphyigtswgevsypgvektmkeadavialapvfndysttgwtdipd
pkklvlaeprsvvvngirfpsvhlkdyltrlaekvskktgaldffkslnagelkkadpad
psaplvnaeiarqiedlltpnttviaetgdswfnaqrmklpngarveyemqwghigwsvp
aafgyavgaperrnilmvgdgsfqltaqevaqmvrlklpviiflinnygytievmihdgp
ynniknwdyaalmevfngnggydsgagkglkaktaaeleeaikvaldntdgptliecfia
redcteelvkwgervaaansrkpvnkl

Chain 'B':
Sequence, based on SEQRES records: (download)

>5tmaB (B:)
mdytvgtylaerlvqiglkhhfavagdynlvlldnlldnknmeqvyccnelncgfsaegy
arakgaaaavvtysvgalsafdaiggayaenlpvilisgapnnndhaaahvlhhalgktd
yhyqlemaknitaaaeaiytpeeapakidhviktalrekkpvyleiacniasmpcaapgp
asalfndeasdeaslnaaveetlkfienrdkvavlvgsklraaaaeeaavkfadalggav
atmaaaksffpeenphyigtswgevsypgvektmkeadavialapvfndysttgwtdipd
pkklvlaeprsvvvngirfpsvhlkdyltrlaekvskktgaldffkslnagelkkadpad
psaplvnaeiarqiedlltpnttviaetgdswfnaqrmklpngarveyemqwghigwsvp
aafgyavgaperrnilmvgdgsfqltaqevaqmvrlklpviiflinnygytievmihdgp
ynniknwdyaalmevfngnggydsgagkglkaktaaeleeaikvaldntdgptliecfia
redcteelvkwgervaaansrkpvnklllehhhhhh

Sequence, based on observed residues (ATOM records): (download)

>5tmaB (B:)
mdytvgtylaerlvqiglkhhfavagdynlvlldnlldnknmeqvyccnelncgfsaegy
arakgaaaavvtysvgalsafdaiggayaenlpvilisgapnnndhaaahvlhhalgktd
yhyqlemaknitaaaeaiytpeeapakidhviktalrekkpvyleiacniasmpcaapgp
asalfndeasdeaslnaaveetlkfienrdkvavlvgsklraaaaeeaavkfadalggav
atmaaaksffpeenphyigtswgevsypgvektmkeadavialapvfndysttgwtdipd
pkklvlaeprsvvvngirfpsvhlkdyltrlaekvskktgaldffkslnagelkkadpad
psaplvnaeiarqiedlltpnttviaetgdswfnaqrmklpngarveyemqwghigwsvp
aafgyavgaperrnilmvgdgsfqltaqevaqmvrlklpviiflinnygytievmihdgp
ynniknwdyaalmevfngnsgagkglkaktaaeleeaikvaldntdgptliecfiaredc
teelvkwgervaaansrkpvn