PDB entry 5tds

View 5tds on RCSB PDB site
Description: Toluene bound in the resting active site of toluene 4-monooxygenase (T4moH)
Class: oxidoreductase
Keywords: Diiron, hydroxylase, substrate complex, OXIDOREDUCTASE
Deposited on 2016-09-19, released 2017-03-22
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-03-22, with a file datestamp of 2017-03-17.
Experiment type: XRAY
Resolution: 1.72 Å
R-factor: N/A
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Toluene-4-monooxygenase system protein A
    Species: Pseudomonas mendocina [TaxId:300]
    Gene: tmoA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q00456
      • conflict (335-336)
    Domains in SCOPe 2.06: d5tdsa_
  • Chain 'B':
    Compound: Toluene-4-monooxygenase system protein E
    Species: Pseudomonas mendocina [TaxId:300]
    Gene: tmoE
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Toluene-4-monooxygenase system protein B
    Species: Pseudomonas mendocina [TaxId:300]
    Gene: tmoB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5tdsc_
  • Chain 'D':
    Compound: Toluene-4-monooxygenase system protein A
    Species: Pseudomonas mendocina [TaxId:300]
    Gene: tmoA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q00456
      • conflict (335-336)
    Domains in SCOPe 2.06: d5tdsd_
  • Chain 'E':
    Compound: Toluene-4-monooxygenase system protein E
    Species: Pseudomonas mendocina [TaxId:300]
    Gene: tmoE
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Toluene-4-monooxygenase system protein B
    Species: Pseudomonas mendocina [TaxId:300]
    Gene: tmoB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5tdsf_
  • Heterogens: FE, MG, MBN, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5tdsA (A:)
mamhprkdwyeltratnwtpsyvteeqlfpermsghmgiplekwesydepyktsypeyvs
iqrekdagaysvkaalerakiyensdpgwistlkshygaiavgeyaavtgegrmarfska
pgnrnmatfgmmdelrhgqlqlffpheyckkdrqfdwawrayhsnewaaiaakhffddii
tgrdaisvaimltfsfetgftnmqflglaadaaeagdytfanlissiqtdesrhaqqggp
alqlliengkreeaqkkvdmaiwrawrlfavltgpvmdyytpledrsqsfkefmyewiig
qferslidlgldkpwywdlflkdidelhhsyhmgvwywrttawwnpaagvtpeerdwlee
kypgwnkrwgrcwdvitenvlndrmdlvspetlpsvcnmsqiplvgvpgddwnievfsle
hngrlyhfgsevdrwvfqqdpvqyqnhmnivdrflagqiqpmtlegalkymgfqsieemg
kdahdfawadkck

    Sequence, based on observed residues (ATOM records): (download) 
    >5tdsA (A:)
amhprkdwyeltratnwtpsyvteeqlfpermsghmgiplekwesydepyktsypeyvsi
qrekdagaysvkaalerakiyensdpgwistlkshygaiavgeyaavtgegrmarfskap
gnrnmatfgmmdelrhgqlqlffpheyckkdrqfdwawrayhsnewaaiaakhffddiit
grdaisvaimltfsfetgftnmqflglaadaaeagdytfanlissiqtdesrhaqqggpa
lqlliengkreeaqkkvdmaiwrawrlfavltgpvmdyytpledrsqsfkefmyewiigq
ferslidlgldkpwywdlflkdidelhhsyhmgvwywrttawwnpaagvtpeerdwleek
ypgwnkrwgrcwdvitenvlndrmdlvspetlpsvcnmsqiplvgvpgddwnievfsleh
ngrlyhfgsevdrwvfqqdpvqyqnhmnivdrflagqiqpmtlegalkymgfqsieemgk
dahdfawadk

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5tdsC (C:)
msafpvhaafekdflvqlvvvdlndsmdqvaekvayhcvnrrvapregvmrvrkhrstel
fprdmtiaesglnptevidvvfee

    Sequence, based on observed residues (ATOM records): (download) 
    >5tdsC (C:)
safpvhaafekdflvqlvvvdlndsmdqvaekvayhcvnrrvapregvmrvrkhrstelf
prdmtiaesglnptevidvvfe

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5tdsD (D:)
mamhprkdwyeltratnwtpsyvteeqlfpermsghmgiplekwesydepyktsypeyvs
iqrekdagaysvkaalerakiyensdpgwistlkshygaiavgeyaavtgegrmarfska
pgnrnmatfgmmdelrhgqlqlffpheyckkdrqfdwawrayhsnewaaiaakhffddii
tgrdaisvaimltfsfetgftnmqflglaadaaeagdytfanlissiqtdesrhaqqggp
alqlliengkreeaqkkvdmaiwrawrlfavltgpvmdyytpledrsqsfkefmyewiig
qferslidlgldkpwywdlflkdidelhhsyhmgvwywrttawwnpaagvtpeerdwlee
kypgwnkrwgrcwdvitenvlndrmdlvspetlpsvcnmsqiplvgvpgddwnievfsle
hngrlyhfgsevdrwvfqqdpvqyqnhmnivdrflagqiqpmtlegalkymgfqsieemg
kdahdfawadkck

    Sequence, based on observed residues (ATOM records): (download) 
    >5tdsD (D:)
amhprkdwyeltratnwtpsyvteeqlfpermsghmgiplekwesydepyktsypeyvsi
qrekdagaysvkaalerakiyensdpgwistlkshygaiavgeyaavtgegrmarfskap
gnrnmatfgmmdelrhgqlqlffpheyckkdrqfdwawrayhsnewaaiaakhffddiit
grdaisvaimltfsfetgftnmqflglaadaaeagdytfanlissiqtdesrhaqqggpa
lqlliengkreeaqkkvdmaiwrawrlfavltgpvmdyytpledrsqsfkefmyewiigq
ferslidlgldkpwywdlflkdidelhhsyhmgvwywrttawwnpaagvtpeerdwleek
ypgwnkrwgrcwdvitenvlndrmdlvspetlpsvcnmsqiplvgvpgddwnievfsleh
ngrlyhfgsevdrwvfqqdpvqyqnhmnivdrflagqiqpmtlegalkymgfqsieemgk
dahdfawadk

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5tdsF (F:)
msafpvhaafekdflvqlvvvdlndsmdqvaekvayhcvnrrvapregvmrvrkhrstel
fprdmtiaesglnptevidvvfee

    Sequence, based on observed residues (ATOM records): (download) 
    >5tdsF (F:)
safpvhaafekdflvqlvvvdlndsmdqvaekvayhcvnrrvapregvmrvrkhrstelf
prdmtiaesglnptevidvvfee