PDB entry 5tcj
View 5tcj on RCSB PDB site
Description: Crystal structure of tryptophan synthase from M. tuberculosis - aminoacrylate and BRD4592-bound form
Class: lyase
Keywords: PLP, heterotetramer, amino acid biosynthesis, substrate channeling, allostery, Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, LYASE
Deposited on
2016-09-15, released
2017-05-31
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-09-13, with a file datestamp of
2017-09-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tryptophan synthase alpha chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpA, Rv1613, MTCY01B2.05
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5tcja_ - Chain 'B':
Compound: tryptophan synthase beta chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpB, Rv1612, MTCY01B2.04
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: tryptophan synthase alpha chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpA, Rv1613, MTCY01B2.05
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5tcjc_ - Chain 'D':
Compound: tryptophan synthase beta chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpB, Rv1612, MTCY01B2.04
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: tryptophan synthase alpha chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpA, Rv1613, MTCY01B2.05
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5tcje_ - Chain 'F':
Compound: tryptophan synthase beta chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpB, Rv1612, MTCY01B2.04
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: tryptophan synthase alpha chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpA, Rv1613, MTCY01B2.05
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5tcjg_ - Chain 'H':
Compound: tryptophan synthase beta chain
Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
Gene: trpB, Rv1612, MTCY01B2.04
Database cross-references and differences (RAF-indexed):
- Heterogens: MLI, FMT, P1T, CS, 79V, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5tcjA (A:)
mvaveqseasrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgv
pysdpgmdgptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdaf
ardlaaagglglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfv
yaastmgvtgardavsqaapelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgs
alvtalteglprlraltgelaagvrlgmsahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5tcjA (A:)
easrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgvpysdpgm
dgptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdafardlaaa
gglglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfvyaassqa
apelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgsalvtalteglprlraltg
elaagvrlg
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5tcjC (C:)
mvaveqseasrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgv
pysdpgmdgptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdaf
ardlaaagglglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfv
yaastmgvtgardavsqaapelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgs
alvtalteglprlraltgelaagvrlgmsahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5tcjC (C:)
easrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgvpysdpgm
dgptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdafardlaaa
gglglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfvyaassqa
apelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgsalvtalteglprlraltg
elaagvrl
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>5tcjE (E:)
mvaveqseasrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgv
pysdpgmdgptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdaf
ardlaaagglglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfv
yaastmgvtgardavsqaapelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgs
alvtalteglprlraltgelaagvrlgmsahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5tcjE (E:)
asrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgvpysdpgmd
gptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdafardlaaag
glglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfvyaassqaa
pelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgsalvtalteglprlraltge
laagvr
- Chain 'F':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>5tcjG (G:)
mvaveqseasrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgv
pysdpgmdgptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdaf
ardlaaagglglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfv
yaastmgvtgardavsqaapelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgs
alvtalteglprlraltgelaagvrlgmsahhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5tcjG (G:)
asrlgpvfdscrannraaligylptgypdvpasvaamtalvesgcdiievgvpysdpgmd
gptiarateaalrggvrvrdtlaaveaisiaggravvmtywnpvlrygvdafardlaaag
glglitpdlipdeaqqwlaaseehrldriflvapsstperlaatveasrgfvyaassqaa
pelvgrvkavsdipvgvglgvrsraqaaqiaqyadgvivgsalvtalteglprlraltge
laagvrlg
- Chain 'H':
No sequence available.