PDB entry 5t5q

View 5t5q on RCSB PDB site
Description: Crystal structure of Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase from Brucella melitensis
Class: oxidoreductase
Keywords: SSGCID, Brucella melitensis, Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase, BAB2_0029, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease, OXIDOREDUCTASE
Deposited on 2016-08-31, released 2016-11-09
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-11-09, with a file datestamp of 2016-11-04.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase
    Species: Brucella abortus (strain 2308) [TaxId:359391]
    Gene: BAB2_0029
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5t5qa_
  • Chain 'B':
    Compound: Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase
    Species: Brucella abortus (strain 2308) [TaxId:359391]
    Gene: BAB2_0029
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5t5qb_
  • Chain 'C':
    Compound: Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase
    Species: Brucella abortus (strain 2308) [TaxId:359391]
    Gene: BAB2_0029
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5t5qc_
  • Chain 'D':
    Compound: Short-chain dehydrogenase/reductase SDR:Glucose/ribitol dehydrogenase
    Species: Brucella abortus (strain 2308) [TaxId:359391]
    Gene: BAB2_0029
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5t5qd_
  • Heterogens: NAD, SO4, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5t5qA (A:)
gsmkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperia
tikadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgv
fylckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvn
gvspgiietpmtsellktrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqv
nggiyma

    Sequence, based on observed residues (ATOM records): (download) 
    >5t5qA (A:)
mkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperiati
kadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgvfy
lckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvngv
spgiiettrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqvnggiyma

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5t5qB (B:)
gsmkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperia
tikadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgv
fylckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvn
gvspgiietpmtsellktrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqv
nggiyma

    Sequence, based on observed residues (ATOM records): (download) 
    >5t5qB (B:)
mkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperiati
kadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgvfy
lckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvngv
spgiiermdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqvnggiyma

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5t5qC (C:)
gsmkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperia
tikadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgv
fylckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvn
gvspgiietpmtsellktrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqv
nggiyma

    Sequence, based on observed residues (ATOM records): (download) 
    >5t5qC (C:)
mkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperiati
kadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgvfy
lckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvngv
spgiietpmtsellktrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqvng
giyma

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5t5qD (D:)
gsmkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperia
tikadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgv
fylckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvn
gvspgiietpmtsellktrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqv
nggiyma

    Sequence, based on observed residues (ATOM records): (download) 
    >5t5qD (D:)
mkfefenrtlvltganggigraiaelfhasganlvltdldregldafaaslgsperiati
kadassaddaektvalamerfggidflvpsagiyqakpfaemsdadwhrtisinldgvfy
lckralpalkedssivtlaslaayrgayvnahygatkgamvsmtralsrelapktrvngv
spgiietpmtsellktrmdetmtqtplkrlgkpseiasviaflcspaasfvtgetiqvng
giyma