PDB entry 5ojj

View 5ojj on RCSB PDB site
Description: Crystal structure of the Zn-bound ubiquitin-conjugating enzyme Ube2T
Class: ligase
Keywords: Ubiquitin conjugating enzyme, zinc, domain swap, oligomer, LIGASE
Deposited on 2017-07-21, released 2017-10-04
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ubiquitin-conjugating enzyme e2 t
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2T, HSPC150, PIG50
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ojja_
  • Chain 'B':
    Compound: ubiquitin-conjugating enzyme e2 t
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2T, HSPC150, PIG50
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ojjb_
  • Chain 'C':
    Compound: ubiquitin-conjugating enzyme e2 t
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2T, HSPC150, PIG50
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ojjc_
  • Chain 'D':
    Compound: ubiquitin-conjugating enzyme e2 t
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2T, HSPC150, PIG50
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ojjd_
  • Chain 'E':
    Compound: ubiquitin-conjugating enzyme e2 t
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2T, HSPC150, PIG50
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ojje_
  • Chain 'F':
    Compound: ubiquitin-conjugating enzyme e2 t
    Species: Homo sapiens [TaxId:9606]
    Gene: UBE2T, HSPC150, PIG50
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5ojjf_
  • Heterogens: ACT, ZN, TRS, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ojjA (A:)
mqrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiper
ypfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnp
ddplmadissefkynkpaflknarqwtekharqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ojjA (A:)
asrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiperypf
eppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnpddp
lmadissefkynkpaflknarqwtekharqk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ojjB (B:)
mqrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiper
ypfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnp
ddplmadissefkynkpaflknarqwtekharqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ojjB (B:)
asrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiperypf
eppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnpddp
lmadissefkynkpaflknarqwtekharqk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5ojjC (C:)
mqrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiper
ypfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnp
ddplmadissefkynkpaflknarqwtekharqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ojjC (C:)
asrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiperypf
eppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnpddp
lmadissefkynkpaflknarqwtekhar

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5ojjD (D:)
mqrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiper
ypfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnp
ddplmadissefkynkpaflknarqwtekharqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ojjD (D:)
asrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiperypf
eppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnpddp
lmadissefkynkpaflknarqwtekharqk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5ojjE (E:)
mqrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiper
ypfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnp
ddplmadissefkynkpaflknarqwtekharqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ojjE (E:)
qrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviipery
pfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnpd
dplmadissefkynkpaflknarqwtekharq

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5ojjF (F:)
mqrasrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiper
ypfeppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnp
ddplmadissefkynkpaflknarqwtekharqk

    Sequence, based on observed residues (ATOM records): (download) 
    >5ojjF (F:)
asrlkrelhmlatepppgitcwqdkdqmddlraqilggantpyekgvfkleviiperypf
eppqirfltpiyhpnidsagricldvlklppkgawrpslniatvltsiqllmsepnpddp
lmadissefkynkpaflknarqwtekharq