PDB entry 5o44

View 5o44 on RCSB PDB site
Description: Crystal structure of unbranched mixed tri-Ubiquitin chain containing K48 and K63 linkages.
Class: signaling protein
Keywords: Mixed linkage Ubiquitin chain, signaling protein
Deposited on 2017-05-26, released 2017-11-08
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-12-06, with a file datestamp of 2017-12-01.
Experiment type: XRAY
Resolution: 3.14 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin
    Species: MUSCA DOMESTICA [TaxId:7370]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q45TR8 (0-75)
      • engineered mutation (47)
    Domains in SCOPe 2.07: d5o44a_
  • Chain 'B':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5o44b_
  • Chain 'C':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5o44c_
  • Chain 'D':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (47)
    Domains in SCOPe 2.07: d5o44d_
  • Chain 'E':
    Compound: Ubiquitin
    Species: MUSCA DOMESTICA [TaxId:7370]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q45TR8 (0-75)
      • engineered mutation (47)
    Domains in SCOPe 2.07: d5o44e_
  • Chain 'F':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (47)
    Domains in SCOPe 2.07: d5o44f_
  • Heterogens: SO4, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o44A (A:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagcqledgrtlsdyn
iqrestlhlvlrlrgg

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o44B (B:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o44C (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlr

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o44D (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
iqkestlhlvlrlrgg

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o44E (E:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagcqledgrtlsdyn
iqrestlhlvlrlrgg

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5o44F (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagrqledgrtlsdyn
iqkestlhlvlrlrgg