PDB entry 5nd6

View 5nd6 on RCSB PDB site
Description: Crystal structure of apo transketolase from Chlamydomonas reinhardtii
Class: transferase
Keywords: TRANSFERASE, Calvin-Benson cycle, thiamine pyrophosphate, Magnesium-dependent activation
Deposited on 2017-03-07, released 2017-06-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-06-28, with a file datestamp of 2017-06-23.
Experiment type: XRAY
Resolution: 1.58 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: transketolase
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Gene: TRK1, CHLREDRAFT_141319
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5nd6a1, d5nd6a2, d5nd6a3
  • Chain 'B':
    Compound: transketolase
    Species: Chlamydomonas reinhardtii [TaxId:3055]
    Gene: TRK1, CHLREDRAFT_141319
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5nd6b1, d5nd6b2, d5nd6b3
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5nd6A (A:)
mhhhhhhhmaaqaapaaakaaapsisrdevekcinairflaidainksksghpgmpmgca
pmgyvlwnevmkynpknpdffnrdrfvlsaghgsmfqysmmhltgydsvpldqikqfrqw
nsltpghpenfvtpgvevttgplgqgicnavglavaeahlaarfnkpdvkpivdhytyci
lgdgcmmegisneacslaghwglgklialyddnkisidghtdisftedvakryealgwhv
ihvingntdvdglraaiaqakavkdkptlikvstligygspnkadshdvhgaplgpdeta
atrknlnwpygefevpqdvydvfrgaikrgaeeeanwhkacaeykakypkewaefealts
cklpenweaalphfkpedkglatrqhsqtminalapalpgliggsadlapsnltlmkisg
dfqkgsyaernlrfgvrehamgaicngialhksglipycatfyiftdymrnamrmsalse
agvvyvmthdsiglgedgpthqpiehlasframpdmlmirpaggnetagaykvaianrkr
pttialsrqnmpnipncsvegvakgaytihdtkagvkpdvilmgtgselelataaagile
kegknvrvvsfpcwelfeeqsaeykesvlpsdvtarvsveaatsfgwakyiglkgkhvgi
dtfgasapaptlyekfgitvnhvveaakatlqh

    Sequence, based on observed residues (ATOM records): (download) 
    >5nd6A (A:)
sisrdevekcinairflaidainksksghpgmpmgcapmgyvlwnevmkynpknpdffnr
drfvlsaghgsmfqysmmhltgydsvpldqikqfrqwnsltpghpenfvtpgvevttgpl
gqgicnavglavaeahlaarfnkpdvkpivdhytycilgdgcmmegisneacslaghwgl
gklialyddnkisidghtdisftedvakryealgwhvihvingntdvdglraaiaqakav
kdkptlikvstligygspnkadshdvhgaplgpdetaatrknlnwpygefevpqdvydvf
rgaikrgaeeeanwhkacaeykakypkewaefealtscklpenweaalphfkpedkglat
rqhsqtminalapalpgliggsadlapsnltlmkisgdfqkgsyaernlrfgvrehamga
icngialhksglipycatfyiftdymrnamrmsalseagvvyvmthdsiglgedgpthqp
iehlasframpdmlmirpaggnetagaykvaianrkrpttialsrqnmpnipncsvegva
kgaytihdtkagvkpdvilmgtgselelataaagilekegknvrvvsfpcwelfeeqsae
ykesvlpsdvtarvsveaatsfgwakyiglkgkhvgidtfgasapaptlyekfgitvnhv
veaakatlq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5nd6B (B:)
mhhhhhhhmaaqaapaaakaaapsisrdevekcinairflaidainksksghpgmpmgca
pmgyvlwnevmkynpknpdffnrdrfvlsaghgsmfqysmmhltgydsvpldqikqfrqw
nsltpghpenfvtpgvevttgplgqgicnavglavaeahlaarfnkpdvkpivdhytyci
lgdgcmmegisneacslaghwglgklialyddnkisidghtdisftedvakryealgwhv
ihvingntdvdglraaiaqakavkdkptlikvstligygspnkadshdvhgaplgpdeta
atrknlnwpygefevpqdvydvfrgaikrgaeeeanwhkacaeykakypkewaefealts
cklpenweaalphfkpedkglatrqhsqtminalapalpgliggsadlapsnltlmkisg
dfqkgsyaernlrfgvrehamgaicngialhksglipycatfyiftdymrnamrmsalse
agvvyvmthdsiglgedgpthqpiehlasframpdmlmirpaggnetagaykvaianrkr
pttialsrqnmpnipncsvegvakgaytihdtkagvkpdvilmgtgselelataaagile
kegknvrvvsfpcwelfeeqsaeykesvlpsdvtarvsveaatsfgwakyiglkgkhvgi
dtfgasapaptlyekfgitvnhvveaakatlqh

    Sequence, based on observed residues (ATOM records): (download) 
    >5nd6B (B:)
sisrdevekcinairflaidainksksghpgmpmgcapmgyvlwnevmkynpknpdffnr
drfvlsaghgsmfqysmmhltgydsvpldqikqfrqwnsltpghpenfvtpgvevttgpl
gqgicnavglavaeahlaarfnkpdvkpivdhytycilgdgcmmegisneacslaghwgl
gklialyddnkisidghtdisftedvakryealgwhvihvingntdvdglraaiaqakav
kdkptlikvstligygspnkadshdvhgaplgpdetaatrknlnwpygefevpqdvydvf
rgaikrgaeeeanwhkacaeykakypkewaefealtscklpenweaalphfkpedkglat
rqhsqtminalapalpgliggsadlapsnltlmkisgdfqkgsyaernlrfgvrehamga
icngialhksglipycatfyiftdymrnamrmsalseagvvyvmthdsiglgedgpthqp
iehlasframpdmlmirpaggnetagaykvaianrkrpttialsrqnmpnipncsvegva
kgaytihdtkagvkpdvilmgtgselelataaagilekegknvrvvsfpcwelfeeqsae
ykesvlpsdvtarvsveaatsfgwakyiglkgkhvgidtfgasapaptlyekfgitvnhv
veaakatlqh