PDB entry 5nb4

View 5nb4 on RCSB PDB site
Description: Atomic resolution structure of C-phycoerythrin from marine cyanobacterium Phormidium sp. A09DM at pH 7.5
Class: photosynthesis
Keywords: Photosynthesis, marine cyanobacterium Phormidium sp.A09DM, C-phycoerythrin, PEB chromophore
Deposited on 2017-03-01, released 2017-09-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-02-07, with a file datestamp of 2018-02-02.
Experiment type: XRAY
Resolution: 1.14 Å
R-factor: N/A
AEROSPACI score: 0.69 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4a_
  • Chain 'B':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4b_
  • Chain 'C':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4c_
  • Chain 'D':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4d_
  • Chain 'E':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4e_
  • Chain 'F':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4f_
  • Chain 'G':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4g_
  • Chain 'H':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4h_
  • Chain 'I':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4i_
  • Chain 'J':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4j_
  • Chain 'K':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4k_
  • Chain 'L':
    Compound: Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit,Phycoerythrin Alpha subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4l_
  • Chain 'M':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4m_
  • Chain 'N':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4n_
  • Chain 'O':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4o_
  • Chain 'P':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4p_
  • Chain 'Q':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4q_
  • Chain 'R':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4r_
  • Chain 'S':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4s_
  • Chain 'T':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4t_
  • Chain 'U':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4u_
  • Chain 'V':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4v_
  • Chain 'W':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4w_
  • Chain 'X':
    Compound: Phycoerythrin Beta subunit,Phycoerythrin Beta subunit
    Species: Phormidium rubidum A09DM [TaxId:865859]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nb4x_
  • Heterogens: PEB, NO3, PI, NA, MPD, MRD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4A (A:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4B (B:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4C (C:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4D (D:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4E (E:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4F (F:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4G (G:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4H (H:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4I (I:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4J (J:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4K (K:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4L (L:)
    mksvvttviaaadaagrfpsssdlesvqgsiqrsaarleaaeklagnidavaqeaynaci
    qkypylnnsgeanstdtfkakclrdvkhymrliqyslvvggtgpldewgiagqrevyral
    glptapyvealsfarnrgcaprdmsaqalteynalldyainsls
    

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4M (M:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4N (N:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4O (O:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4P (P:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4Q (Q:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4R (R:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4S (S:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4T (T:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'U':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4U (U:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4V (V:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4W (W:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals
    

  • Chain 'X':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5nb4X (X:)
    mldafsravvqadastsvvadmgalkqfiaegnrrldavnaiasnascmvsdavagmice
    nqgliqaggncypnrrmaaclrdaeiilryvtyallagdasvlddrclnglketyaalgv
    pttstvravqimkaqaaahikdtpsearaggklrkmgspvvedrcaslvaeassyfdrvi
    sals