PDB entry 5n9x

View 5n9x on RCSB PDB site
Description: Structure of adenylation domain THR1 involved in the biosynthesis of 4-chlorothreonine in Streptomyces SP.OH-5093, ligand bound structure
Class: ligase
Keywords: adenylation domain, substrate specificity, non-ribosomal code, threonine adenylate, ligase
Deposited on 2017-02-27, released 2017-07-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: adenylation domain
    Species: Streptomyces sp. [TaxId:1931]
    Gene: thr1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5n9xa_
  • Chain 'B':
    Compound: adenylation domain
    Species: Streptomyces sp. [TaxId:1931]
    Gene: thr1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5n9xb_
  • Heterogens: THR, ATP, MG, 8QN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5n9xA (A:)
msekkdqypspgysefgatlvdlfsraamempdrtalhiddekisygllhswaegladll
hdagvrkgdrvalrmppganaiaamlgilragaayvpldirnpparnafivtdsqvvalv
gdpgdipeytgplvteenvaalrdreaikdpgperpgpqdvayiiytsgttgrpkgvpvr
hgnvtalfeacsrlfsfsaddrwllfhsmafdfsvweiwgalstgaelvvlpywtartpv
etarvvrdrgitvlnqtptafgalttavlgegidlpelryvvfggekltpavvrpwakrf
gldrphlinmygitettvhatfhrlteddlaaedsvigrplpgfthrivtedgrdaatge
pgelwlagpqvsegylnrpeltaerfttgpardggapppryyhsgdlvsrraggdlvyqg
radlqvklrghrielsdveaavrthpavvdavvwvhefapgdsrlvcaytaqaseegtgp
daralrahvktvlpsymqpsqylalpelprtingkadrasvarafderr

    Sequence, based on observed residues (ATOM records): (download) 
    >5n9xA (A:)
gatlvdlfsraamempdrtalhiddekisygllhswaegladllhdagvrkgdrvalrmp
pganaiaamlgilragaayvpldirnpparnafivtdsqvvalvgdpipeytgplvteen
vaalrpgperpgpqdvayiiytsgttgrpkgvpvrhgnvtalfeacsrlfsfsaddrwll
fhsmafdfsvweiwgalstgaelvvlpywtartpvetarvvrdrgitvlnqtptafgalt
tavlgegidlpelryvvfggekltpavvrpwakrfgldrphlinmygitettvhatfhrl
teddlaaedsvigrplpgfthrivtedgrdaatgepgelwlagpqvsegylnrpeltaer
fttgpppryyhsgdlvsrraggdlvyqgradlqvklrghrielsdveaavrthpavvdav
vwvhefapgdsrlvcaytapdaralrahvktvlpsymqpsqylalpelprtingkadras
varafderr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5n9xB (B:)
msekkdqypspgysefgatlvdlfsraamempdrtalhiddekisygllhswaegladll
hdagvrkgdrvalrmppganaiaamlgilragaayvpldirnpparnafivtdsqvvalv
gdpgdipeytgplvteenvaalrdreaikdpgperpgpqdvayiiytsgttgrpkgvpvr
hgnvtalfeacsrlfsfsaddrwllfhsmafdfsvweiwgalstgaelvvlpywtartpv
etarvvrdrgitvlnqtptafgalttavlgegidlpelryvvfggekltpavvrpwakrf
gldrphlinmygitettvhatfhrlteddlaaedsvigrplpgfthrivtedgrdaatge
pgelwlagpqvsegylnrpeltaerfttgpardggapppryyhsgdlvsrraggdlvyqg
radlqvklrghrielsdveaavrthpavvdavvwvhefapgdsrlvcaytaqaseegtgp
daralrahvktvlpsymqpsqylalpelprtingkadrasvarafderr

    Sequence, based on observed residues (ATOM records): (download) 
    >5n9xB (B:)
fgatlvdlfsraamempdrtalhiddekisygllhswaegladllhdagvrkgdrvalrm
ppganaiaamlgilragaayvpldirnpparnafivtdsqvvalvgdptgplvteenvaa
lrdregperpgpqdvayiiytsgttgrpkgvpvrhgnvtalfeacsrlfsfsaddrwllf
hsmafdfsvweiwgalstgaelvvlptartpvetarvvrdrgitvlnqtptafgalttav
lgegidlpelryvvfggekltpavvrpwakrfgldrphlinmygitettvhatfhrlted
dlaaedsvigrplpgfthrivtedgrdaatgepgelwlagpqvsegylnrpeltaerftt
gppryyhsgdlvsrraggdlvyqgradlqvklrghrielsdveaavrthpavvdavvwvh
efapgdsrlvcaytaqadaralrahvktvlpsymqpsqylalpelprtingkadrasvar
afderr