PDB entry 5mp2
View 5mp2 on RCSB PDB site
Description: XcpQN012 in complex with VHH04
Class: transport protein
Keywords: T2SS, secretin, camedlid nanobody, transport protein
Deposited on
2016-12-15, released
2017-12-13
The last revision prior to the SCOPe 2.06 freeze date was dated
2017-12-13, with a file datestamp of
2017-12-08.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Type II secretion system protein D
Species: Pseudomonas aeruginosa [TaxId:287]
Gene: xcpQ1, PAMH19_1963
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Type II secretion system protein D
Species: Pseudomonas aeruginosa [TaxId:287]
Gene: xcpQ1, PAMH19_1963
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Camelid nanobody VHH04
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5mp2c1, d5mp2c2 - Chain 'D':
Compound: Camelid nanobody VHH04
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5mp2d1, d5mp2d2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5mp2C (C:)
mkyllptaaagllllaaqpamaqvqlvesgggsvqaggslrlscaasgntdssyymgwfr
qgpgkeregvasiyiragipyytdsvkgrftisqdnakntiylqmnslkpedtamyfcag
svrttiqpfkgnyynywgrgtqvtvsshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5mp2C (C:)
vqlvesgggsvqaggslrlscaasgntdssyymgwfrqgpgkeregvasiyiragipyyt
dsvkgrftisqdnakntiylqmnslkpedtamyfcagsvrttiqpfkgnyynywgrgtqv
tvs
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5mp2D (D:)
mkyllptaaagllllaaqpamaqvqlvesgggsvqaggslrlscaasgntdssyymgwfr
qgpgkeregvasiyiragipyytdsvkgrftisqdnakntiylqmnslkpedtamyfcag
svrttiqpfkgnyynywgrgtqvtvsshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5mp2D (D:)
qvqlvesgggsvqaggslrlscaasgntdssyymgwfrqgpgkeregvasiyiragipyy
tdsvkgrftisqdnakntiylqmnslkpedtamyfcagsvrttiqpfkgnyynywgrgtq
vtvss