PDB entry 5mn9

View 5mn9 on RCSB PDB site
Description: Crystal structure of MINDY-1 tMIU in complex with K48-diUb
Class: hydrolase
Keywords: motif interacting with ubiquitin, ubiquitin binding domain, hydrolase and cysteine protease, hydrolase
Deposited on 2016-12-13, released 2017-01-25
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-01-25, with a file datestamp of 2017-01-20.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Ubiquitin-40S ribosomal protein S27a
  Species: Bos taurus [TaxId:9913]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P62992 (0-End)
  Domains in SCOPe 2.06: d5mn9a_
• Chain 'B':
  Compound: Ubiquitin-40S ribosomal protein S27a
  Species: Bos taurus [TaxId:9913]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P62992 (0-75)
  Domains in SCOPe 2.06: d5mn9b_
• Chain 'C':
  Compound: Ubiquitin carboxyl-terminal hydrolase MINDY-1
  Species: Homo sapiens [TaxId:9606]
  Gene: FAM63A, KIAA1390
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q8N5J2 (Start-43)
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >5mn9A (A:)
  mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrlrgg
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >5mn9A (A:)
  mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrl
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >5mn9B (B:)
  mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrlrgg
  

  
  
• Chain 'C':
  No sequence available.