PDB entry 5lrx

View 5lrx on RCSB PDB site
Description: Structure of A20 OTU domain bound to ubiquitin
Class: hydrolase
Keywords: hydrolase, protease, deubiquitinase, OTU domain
Deposited on 2016-08-22, released 2016-10-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-10-19, with a file datestamp of 2016-10-14.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tumor necrosis factor alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3, OTUD7C
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (75)
    Domains in SCOPe 2.06: d5lrxb_
  • Chain 'C':
    Compound: Tumor necrosis factor alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3, OTUD7C
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-75)
      • engineered mutation (75)
    Domains in SCOPe 2.06: d5lrxd_
  • Chain 'E':
    Compound: Tumor necrosis factor alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3, OTUD7C
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Tumor necrosis factor alpha-induced protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: TNFAIP3, OTUD7C
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5lrxB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgx
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5lrxD (D:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgx
    

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.