PDB entry 5lrw

View 5lrw on RCSB PDB site
Description: Structure of Cezanne/OTUD7B OTU domain bound to ubiquitin
Class: hydrolase
Keywords: hydrolase, protease, deubiquitinase, OTU domain
Deposited on 2016-08-22, released 2016-10-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-10-19, with a file datestamp of 2016-10-14.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: OTU domain-containing protein 7B
    Species: Homo sapiens [TaxId:9606]
    Gene: OTUD7B, ZA20D1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6GQQ9 (0-End)
      • cloning artifact (0)
      • linker (139-141)
  • Chain 'B':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-74)
      • linker (75)
    Domains in SCOPe 2.06: d5lrwb1, d5lrwb2
  • Chain 'C':
    Compound: OTU domain-containing protein 7B
    Species: Homo sapiens [TaxId:9606]
    Gene: OTUD7B, ZA20D1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6GQQ9 (0-288)
      • cloning artifact (0)
      • linker (139-141)
  • Chain 'D':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (0-74)
      • linker (75)
    Domains in SCOPe 2.06: d5lrwd1, d5lrwd2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5lrwB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgx
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download)
    >5lrwD (D:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgx