PDB entry 5lpn

View 5lpn on RCSB PDB site
Description: Structure of human Rab10 in complex with the bMERB domain of Mical-1
Class: endocytosis
Keywords: Mical-1, DUF3585, Mical, Rab effector, Rab10, oxidoreductase, endocytosis
Deposited on 2016-08-14, released 2016-08-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-09-06, with a file datestamp of 2017-09-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ras-related protein Rab-10
    Species: Homo sapiens [TaxId:9606]
    Gene: RAB10
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5lpna_
  • Chain 'B':
    Compound: Protein-methionine sulfoxide oxidase MICAL1
    Species: Homo sapiens [TaxId:9606]
    Gene: MICAL1, MICAL, NICAL
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Ras-related protein Rab-10
    Species: Homo sapiens [TaxId:9606]
    Gene: RAB10
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5lpnc_
  • Heterogens: MG, GNP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5lpnA (A:)
ghmakktydllfkllligdsgvgktcvlfrfsddafnttfistigidfkiktvelqgkki
klqiwdtagqerfhtittsyyrgamgimlvyditngksfeniskwlrnidehanedverm
llgnkcdmddkrvvpkgkgeqiarehgirffetsakaniniekafltlaedilrktp

    Sequence, based on observed residues (ATOM records): (download) 
    >5lpnA (A:)
tydllfkllligdsgvgktcvlfrfsddafnttfistigidfkiktvelqgkkiklqiwd
tagqerfhtittsyyrgamgimlvyditngksfeniskwlrnidehanedvermllgnkc
dmddkrvvpkgkgeqiarehgirffetsakaniniekafltlaedilrktp

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5lpnC (C:)
ghmakktydllfkllligdsgvgktcvlfrfsddafnttfistigidfkiktvelqgkki
klqiwdtagqerfhtittsyyrgamgimlvyditngksfeniskwlrnidehanedverm
llgnkcdmddkrvvpkgkgeqiarehgirffetsakaniniekafltlaedilrktp

    Sequence, based on observed residues (ATOM records): (download) 
    >5lpnC (C:)
ydllfkllligdsgvgktcvlfrfsddafnttfistigidfkiktvelqgkkiklqiwdt
agqerfhtittsyyrgamgimlvyditngksfeniskwlrnidehanedvermllgnkcd
mddkrvvpkgkgeqiarehgietsakaniniekafltlaedilrktp