PDB entry 5loq

View 5loq on RCSB PDB site
Description: Structure of coproheme bound HemQ from Listeria monocytogenes
Class: oxidoreductase
Keywords: HemQ, heme biosynthesis, coproheme, heme b, Gram-positive pathogens, oxidoreductase
Deposited on 2016-08-09, released 2016-10-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-12-14, with a file datestamp of 2016-12-09.
Experiment type: XRAY
Resolution: 1.69 Å
R-factor: N/A
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative heme-dependent peroxidase lmo2113
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo2113
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5loqa_
  • Chain 'B':
    Compound: Putative heme-dependent peroxidase lmo2113
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo2113
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5loqb_
  • Chain 'C':
    Compound: Putative heme-dependent peroxidase lmo2113
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo2113
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5loqc_
  • Chain 'D':
    Compound: Putative heme-dependent peroxidase lmo2113
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo2113
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5loqd_
  • Chain 'E':
    Compound: Putative heme-dependent peroxidase lmo2113
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: lmo2113
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5loqe_
  • Heterogens: NA, FEC, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5loqA (A:)
neavktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiy
silgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmagg
ddpyqnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsy
agkvqqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlll
seqlsklfti

    Sequence, based on observed residues (ATOM records): (download) 
    >5loqA (A:)
avktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiysi
lgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmaggdd
pyqnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsyag
kvqqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlllse
qlsklfti

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5loqB (B:)
neavktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiy
silgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmagg
ddpyqnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsy
agkvqqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlll
seqlsklfti

    Sequence, based on observed residues (ATOM records): (download) 
    >5loqB (B:)
ktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiysilg
qkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsyqnkgvrarlypal
ppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsyagkvqqiiggsigfddy
ewgvtlfsddalefkrivtemrfdeasaryaefgsffignlllseqlsklfti

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5loqC (C:)
neavktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiy
silgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmagg
ddpyqnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsy
agkvqqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlll
seqlsklfti

    Sequence, based on observed residues (ATOM records): (download) 
    >5loqC (C:)
eavktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiys
ilgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnyqnkgvrarl
ypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsyagkvqqiiggsig
fddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlllseqlsklfti

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5loqD (D:)
neavktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiy
silgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmagg
ddpyqnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsy
agkvqqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlll
seqlsklfti

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5loqE (E:)
neavktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiy
silgqkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnylashmagg
ddpyqnkgvrarlypalppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsy
agkvqqiiggsigfddyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlll
seqlsklfti

    Sequence, based on observed residues (ATOM records): (download) 
    >5loqE (E:)
ktldgwfclhdfrsidwaawrelnpgnqelmlnelshflsdmeitknigegehtiysilg
qkadlvfftlrdslealnevenrfnklaiadyllptysyisvvelsnyyqnkgvrarlyp
alppkkhicfypmskkrdgadnwymlpmeerqqlirdhgligrsyagkvqqiiggsigfd
dyewgvtlfsddalefkrivtemrfdeasaryaefgsffignlllseqlsklfti