PDB entry 5lds

View 5lds on RCSB PDB site
Description: Structure of the porcine aminopeptidase N ectodomain
Class: hydrolase
Keywords: CD13, pAPN, aminopeptidase, Coronavirus, receptor, enzime, HYDROLASE
Deposited on 2016-06-27, released 2017-04-05
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-04-19, with a file datestamp of 2017-04-14.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aminopeptidase N
    Species: Sus scrofa [TaxId:9823]
    Gene: ANPEP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15145 (Start-944)
      • conflict (88-89)
    Domains in SCOPe 2.07: d5ldsa1, d5ldsa2, d5ldsa3, d5ldsa4
  • Chain 'B':
    Compound: Aminopeptidase N
    Species: Sus scrofa [TaxId:9823]
    Gene: ANPEP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15145 (Start-944)
      • conflict (88-89)
    Domains in SCOPe 2.07: d5ldsb1, d5ldsb2, d5ldsb3, d5ldsb4
  • Chain 'C':
    Compound: Aminopeptidase N
    Species: Sus scrofa [TaxId:9823]
    Gene: ANPEP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15145 (Start-944)
      • conflict (88-89)
    Domains in SCOPe 2.07: d5ldsc1, d5ldsc2, d5ldsc3, d5ldsc4
  • Chain 'D':
    Compound: Aminopeptidase N
    Species: Sus scrofa [TaxId:9823]
    Gene: ANPEP
    Database cross-references and differences (RAF-indexed):
    • Uniprot P15145 (Start-944)
      • conflict (88-89)
    Domains in SCOPe 2.07: d5ldsd1, d5ldsd2, d5ldsd3, d5ldsd4
  • Heterogens: ZN, NAG, BMA, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5ldsA (A:)
ypydvpdyagaqparspeknknaehvpqaptsptitttaaitldqskpwnryrlpttllp
dsynvtlrpyltpnadglyifkgksivrficqeptdviiihskklnyttqghmvvlrgvg
dsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladdlagfyrseymegnv
kkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnmppkgsstplaedpn
wsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnaiaeghgmyalnvtgp
ilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallfdpqsssisnkervv
tviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptwnlkdlivpgdvyrv
mavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsnfltedlfkeglasy
lhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmgfpvitvdtktgnis
qkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqaqndlfktasddwvl
lnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfnlatahmvpvtlald
ntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqveplfqhfetltknwt
erpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennpihpnlrstiycnai
aqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgytlnpdlirkqdats
tinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtrrfssefelqqleqf
kknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

    Sequence, based on observed residues (ATOM records): (download) 
    >5ldsA (A:)
ldqskpwnryrlpttllpdsynvtlrpyltpnadglyifkgksivrficqeptdviiihs
kklnythmvvlrgvgdsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgelad
dlagfyrseymegnvkkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsn
mppkgsstplaedpnwsvtefettpvmstyllayivsefqsvnetaqngvliriwarpna
iaeghgmyalnvtgpilnffanhyntsyplpksdqialpdfnagamenwglvtyrenall
fdpqsssisnkervvtviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaept
wnlkdlivpgdvyrvmavdalasshplttpaeevntpaqisemfdsisyskgasvirmls
nfltedlfkeglasylhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqm
gfpvitvdtktgnisqkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsq
aqndlfktasddwvllnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsf
nlatahmvpvtlaldntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqv
eplfqhfetltknwterpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpenn
pihpnlrstiycnaiaqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylg
ytlnpdlirkqdatstinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvt
rrfssefelqqleqfkknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5ldsB (B:)
ypydvpdyagaqparspeknknaehvpqaptsptitttaaitldqskpwnryrlpttllp
dsynvtlrpyltpnadglyifkgksivrficqeptdviiihskklnyttqghmvvlrgvg
dsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladdlagfyrseymegnv
kkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnmppkgsstplaedpn
wsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnaiaeghgmyalnvtgp
ilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallfdpqsssisnkervv
tviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptwnlkdlivpgdvyrv
mavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsnfltedlfkeglasy
lhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmgfpvitvdtktgnis
qkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqaqndlfktasddwvl
lnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfnlatahmvpvtlald
ntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqveplfqhfetltknwt
erpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennpihpnlrstiycnai
aqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgytlnpdlirkqdats
tinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtrrfssefelqqleqf
kknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

    Sequence, based on observed residues (ATOM records): (download) 
    >5ldsB (B:)
qskpwnryrlpttllpdsynvtlrpyltpnadglyifkgksivrficqeptdviiihskk
lnythmvvlrgvgdsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladdl
agfyrseymegnvkkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnmp
pkgsstplaedpnwsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnaia
eghgmyalnvtgpilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallfd
pqsssisnkervvtviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptwn
lkdlivpgdvyrvmavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsnf
ltedlfkeglasylhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmgf
pvitvdtktgnisqkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqaq
ndlfktasddwvllnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfnl
atahmvpvtlaldntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqvep
lfqhfetltknwterpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennpi
hpnlrstiycnaiaqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgyt
lnpdlirkqdatstinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtrr
fssefelqqleqfkknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5ldsC (C:)
ypydvpdyagaqparspeknknaehvpqaptsptitttaaitldqskpwnryrlpttllp
dsynvtlrpyltpnadglyifkgksivrficqeptdviiihskklnyttqghmvvlrgvg
dsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladdlagfyrseymegnv
kkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnmppkgsstplaedpn
wsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnaiaeghgmyalnvtgp
ilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallfdpqsssisnkervv
tviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptwnlkdlivpgdvyrv
mavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsnfltedlfkeglasy
lhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmgfpvitvdtktgnis
qkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqaqndlfktasddwvl
lnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfnlatahmvpvtlald
ntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqveplfqhfetltknwt
erpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennpihpnlrstiycnai
aqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgytlnpdlirkqdats
tinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtrrfssefelqqleqf
kknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

    Sequence, based on observed residues (ATOM records): (download) 
    >5ldsC (C:)
dqskpwnryrlpttllpdsynvtlrpyltpnadglyifkgksivrficqeptdviiihsk
klnythmvvlrgvgdsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladd
lagfyrseymegnvkkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnm
ppkgsstplaedpnwsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnai
aeghgmyalnvtgpilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallf
dpqsssisnkervvtviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptw
nlkdlivpgdvyrvmavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsn
fltedlfkeglasylhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmg
fpvitvdtktgnisqkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqa
qndlfktasddwvllnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfn
latahmvpvtlaldntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqve
plfqhfetltknwterpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennp
ihpnlrstiycnaiaqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgy
tlnpdlirkqdatstinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtr
rfssefelqqleqfkknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5ldsD (D:)
ypydvpdyagaqparspeknknaehvpqaptsptitttaaitldqskpwnryrlpttllp
dsynvtlrpyltpnadglyifkgksivrficqeptdviiihskklnyttqghmvvlrgvg
dsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladdlagfyrseymegnv
kkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnmppkgsstplaedpn
wsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnaiaeghgmyalnvtgp
ilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallfdpqsssisnkervv
tviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptwnlkdlivpgdvyrv
mavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsnfltedlfkeglasy
lhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmgfpvitvdtktgnis
qkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqaqndlfktasddwvl
lnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfnlatahmvpvtlald
ntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqveplfqhfetltknwt
erpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennpihpnlrstiycnai
aqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgytlnpdlirkqdats
tinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtrrfssefelqqleqf
kknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs

    Sequence, based on observed residues (ATOM records): (download) 
    >5ldsD (D:)
qskpwnryrlpttllpdsynvtlrpyltpnadglyifkgksivrficqeptdviiihskk
lnythmvvlrgvgdsqvpeidrtelvelteylvvhlkgslqpghmyemesefqgeladdl
agfyrseymegnvkkvlattqmqstdarksfpcfdepamkatfnitlihpnnltalsnmp
pkgsstplaedpnwsvtefettpvmstyllayivsefqsvnetaqngvliriwarpnaia
eghgmyalnvtgpilnffanhyntsyplpksdqialpdfnagamenwglvtyrenallfd
pqsssisnkervvtviahelahqwfgnlvtlawwndlwlnegfasyveylgadhaeptwn
lkdlivpgdvyrvmavdalasshplttpaeevntpaqisemfdsisyskgasvirmlsnf
ltedlfkeglasylhafayqnttyldlwehlqkavdaqtsirlpdtvraimdrwtlqmgf
pvitvdtktgnisqkhflldsesnvtrssafdylwivpissikngvmqdhywlrdvsqaq
ndlfktasddwvllnvnvtgyfqvnydednwrmiqhqlqtnlsvipvinraqviydsfnl
atahmvpvtlaldntlflngekeympwqaalsslsyfslmfdrsevygpmkkylrkqvep
lfqhfetltknwterpenlmdqyseinaistacsnglpqcenlaktlfdqwmsdpennpi
hpnlrstiycnaiaqggqdqwdfawgqlqqaqlvneadklrsalacsnevwllnrylgyt
lnpdlirkqdatstinsiasnvigqplawdfvqsnwkklfqdygggsfsfsnliqgvtrr
fssefelqqleqfkknnmdvgfgsgtraleqalektkanikwvkenkevvlnwfiehs