PDB entry 5l8w
View 5l8w on RCSB PDB site
Description: Structure of USP12-UB-PRG/UAF1
Class: structural protein
Keywords: DUB-Activator complex USP1 paralog, STRUCTURAL PROTEIN
Deposited on
2016-06-08, released
2016-09-28
The last revision prior to the SCOPe 2.06 freeze date was dated
2016-09-28, with a file datestamp of
2016-09-23.
Experiment type: XRAY
Resolution: 2.79 Å
R-factor: N/A
AEROSPACI score: 0.16
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin carboxyl-terminal hydrolase 12
Species: Homo sapiens [TaxId:9606]
Gene: USP12, UBH1, USP12L1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5l8wa_ - Chain 'B':
Compound: WD repeat-containing protein 48
Species: Homo sapiens [TaxId:9606]
Gene: WDR48, KIAA1449, UAF1
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Polyubiquitin-B
Species: Homo sapiens [TaxId:9606]
Gene: UBB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5l8wc_ - Heterogens: AYE, ZN, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5l8wA (A:)
hhhhhhmeilmtvskfasictmganasalekeigpeqfpvnehyfglvnfgntcycnsvl
qalyfcrpfrekvlayksqprkkeslltcladlfhsiatqkkkvgvippkkfitrlrken
elfdnymqqdaheflnyllntiadilqeerkqekqngrlpngnidnennnstpdptwvhe
ifqgtltnetrcltcetisskdedfldlsvdveqntsithclrgfsntetlcseykyyce
ecrskqeahkrmkvkklpmilalhlkrfkymdqlhrytklsyrvvfplelrlfntsgdat
npdrmydlvavvvhcgsgpnrghyiaivkshdfwllfdddivekidaqaieefygltsdi
sknsesgyilfyqsrd
Sequence, based on observed residues (ATOM records): (download)
>5l8wA (A:)
nehyfglvnfgntcycnsvlqalyfcrpfrekvlayksqprkkeslltcladlfhsiatq
kkkvgvippkkfitrlrkenelfdnymqqdaheflnyllntiadilqeerkqekqpdptw
vheifqgtltnetrcltcetisskdedfldlsvdveqntsithclrgfsntetlcseyky
yceecrskqeahkrmkvkklpmilalhlkrfkymdqlhrytklsyrvvfplelrlfntsg
datnpdrmydlvavvvhcgsgpnrghyiaivkshdfwllfdddivekidaqaieefyglt
sdisknsesgyilfyqsrd
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5l8wC (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg