PDB entry 5k8y
View 5k8y on RCSB PDB site
Description: Structure of the Mus musclus Langerin carbohydrate recognition domain
Class: immune system
Keywords: C-TYPE LECTIN, GLYCOPROTEIN, CARBOHYDRATE BINDING PROTEIN, CALCIUM BINDING, CRD Domain, LECTIN, IMMUNE SYSTEM
Deposited on
2016-05-31, released
2016-12-07
The last revision prior to the SCOPe 2.06 freeze date was dated
2016-12-07, with a file datestamp of
2016-12-02.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: C-type lectin domain family 4 member K
Species: Mus musculus [TaxId:10090]
Gene: CD207, CLEC4K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5k8ya1, d5k8ya2 - Chain 'B':
Compound: C-type lectin domain family 4 member K
Species: Mus musculus [TaxId:10090]
Gene: CD207, CLEC4K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5k8yb1, d5k8yb2 - Heterogens: CA, P6G, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5k8yA (A:)
magilemvargwkyfsgnfyyfsrtpktwysaeqfcisrkahltsvsseseqkflykaad
giphwigltkagsegdwywvdqtsfnkeqsrrfwipgepnnagnnehcanirvsalkcwn
dgpcdntflfickrpyvqttegtwshpqfek
Sequence, based on observed residues (ATOM records): (download)
>5k8yA (A:)
agilemvargwkyfsgnfyyfsrtpktwysaeqfcisrkahltsvsseseqkflykaadg
iphwigltkagsegdwywvdqtsfnkeqsrrfwipgepnnagnnehcanirvsalkcwnd
gpcdntflfickrpyv
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5k8yB (B:)
magilemvargwkyfsgnfyyfsrtpktwysaeqfcisrkahltsvsseseqkflykaad
giphwigltkagsegdwywvdqtsfnkeqsrrfwipgepnnagnnehcanirvsalkcwn
dgpcdntflfickrpyvqttegtwshpqfek
Sequence, based on observed residues (ATOM records): (download)
>5k8yB (B:)
agilemvargwkyfsgnfyyfsrtpktwysaeqfcisrkahltsvsseseqkflykaadg
iphwigltkagsegdwywvdqtsfnkeqsrrfwipgepnnagnnehcanirvsalkcwnd
gpcdntflfickrpyv