PDB entry 5k39
View 5k39 on RCSB PDB site
Description: the type II cohesin dockerin complex from clostridium thermocellum
Class: structural protein
Keywords: S-LAYER, SECRETED, CELL WALL, MEMBRANE PROTEIN, structural protein
Deposited on
2016-05-19, released
2017-03-29
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-03-29, with a file datestamp of
2017-03-24.
Experiment type: XRAY
Resolution: 1.98 Å
R-factor: N/A
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Cellulosome anchoring protein cohesin region
Species: Ruminiclostridium thermocellum 27405 [TaxId:1249482]
Gene: AD2_00639
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0U3TQ90 (3-162)
- expression tag (2)
- expression tag (163-168)
Domains in SCOPe 2.08: d5k39a1, d5k39a2, d5k39a3 - Chain 'B':
Compound: Dockerin module from a protein of unknown function
Species: Clostridium thermocellum 27405 [TaxId:1249482]
Gene: Cthe_1806
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5k39b1, d5k39b2 - Heterogens: CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5k39A (A:)
masahialeldktkvkvgdvivatvkaknmtsmagiqvnikydpevlqaidpatgkpftk
etllvdpellsnreynplltavndinsgiinyascyvywdsyresgvsestgiigkvgfk
vlkaanttvkleetrftpnsidgtlvidwygqqivgykviqpdlehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>5k39A (A:)
sahialeldktkvkvgdvivatvkaknmtsmagiqvnikydpevlqaidpatgkpftket
llvdpellsnreynplltavndinsgiinyascyvywdsyresgvsestgiigkvgfkvl
kaanttvkleetrftpnsidgtlvidwygqqivgykviqpdlehhhh
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5k39B (B:)
mnndstdkttvsgyisvdfdyppeseskiksgfnvkvagtelstktdekgyfeisgipgd
mreftleiskrnylkrnvtvngtgklvvstednplilwagdverkgvqdnainmvdvmei
skvfgtragdeeyvaeldlnmdgainlfdiaivirhfnalpsry
Sequence, based on observed residues (ATOM records): (download)
>5k39B (B:)
dkttvsgyisvdfdyppeseskiksgfnvkvagtelstktdekgyfeisgipgdmreftl
eiskrnylkrnvtvngtgklvvstednplilwagdverkgvqdnainmvdvmeiskvfgt
ragdeeyvaeldlnmdgainlfdiaivirhfna