PDB entry 5jq1
View 5jq1 on RCSB PDB site
Description: Efficient targeting of the asialoglycoprotein receptor by polyvalent display of a compact galactosamine mimic
Class: sugar binding protein
Keywords: asialoglycoprotein receptor, carbohydrates, liver targeting, Sugar Binding Protein
Deposited on
2016-05-04, released
2017-06-14
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-06-14, with a file datestamp of
2017-06-09.
Experiment type: XRAY
Resolution: 1.83 Å
R-factor: N/A
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: asialoglycoprotein receptor 1
Species: Homo sapiens [TaxId:9606]
Gene: ASGR1, CLEC4H1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5jq1a_ - Chain 'B':
Compound: asialoglycoprotein receptor 1
Species: Homo sapiens [TaxId:9606]
Gene: ASGR1, CLEC4H1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5jq1b_ - Heterogens: CA, ZPF, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5jq1A (A:)
mgsertccpvnwveherscywfsrsgkawadadnycrledahlvvvtsweeqkfvqhhig
pvntwmglhdqngpwkwvdgtdyetgfknwrpeqpddwyghglgggedcahftddgrwnd
dvcqrpyrwvceteldkasqeppll
Sequence, based on observed residues (ATOM records): (download)
>5jq1A (A:)
tccpvnwveherscywfsrsgkawadadnycrledahlvvvtsweeqkfvqhhigpvntw
mglhdqngpwkwvdgtdyetgfknwrpeqpddwyghglgggedcahftddgrwnddvcqr
pyrwvcetel
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5jq1B (B:)
mgsertccpvnwveherscywfsrsgkawadadnycrledahlvvvtsweeqkfvqhhig
pvntwmglhdqngpwkwvdgtdyetgfknwrpeqpddwyghglgggedcahftddgrwnd
dvcqrpyrwvceteldkasqeppll
Sequence, based on observed residues (ATOM records): (download)
>5jq1B (B:)
ccpvnwveherscywfsrsgkawadadnycrledahlvvvtsweeqkfvqhhigpvntwm
glhdqngpwkwvdgtdyetgfknwrpeqpddwyghglgggedcahftddgrwnddvcqrp
yrwvcetel