PDB entry 5ixa

View 5ixa on RCSB PDB site
Description: HCMV DNA polymerase processivity subunit UL44 at neutral pH and low salt
Class: replication
Keywords: HCMV Pol accessory subunit, protein-protein interaction, human cytomegalovirus, DNA polymerase, processivity factor, REPLICATION
Deposited on 2016-03-23, released 2016-11-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: XRAY
Resolution: 2.68 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase processivity factor
    Species: Human cytomegalovirus (strain AD169) [TaxId:10360]
    Gene: UL44
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16790
      • see remark 999 (204)
    Domains in SCOPe 2.08: d5ixaa1, d5ixaa2
  • Chain 'B':
    Compound: DNA polymerase processivity factor
    Species: Human cytomegalovirus (strain AD169) [TaxId:10360]
    Gene: UL44
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16790
      • see remark 999 (204)
    Domains in SCOPe 2.08: d5ixab1, d5ixab2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5ixaA (A:)
    mdrktrlsepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvsk
    itfnssclyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapd
    fnmefssacvhgqdivresensavhvdldfgvvadllkwigphtrvkrnvkkapcptgtv
    qilvhagppaikfiltngseleftsnnrvsfhgvknmrinvqlknfyqtllncavtklpc
    tlrivtehdtllyvasrnglfavenflteepfqrgdpfdknyvgnsgksr
    

    Sequence, based on observed residues (ATOM records): (download)
    >5ixaA (A:)
    sepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvskitfnssc
    lyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapdfnmefss
    acvhgqdivresensavhvdldfgvvadllkwigphtgtvqilvhagppaikfiltngse
    leftsnnrvsfhgvknmrinvqlknfyqtllncavtklpctlrivtehdtllyvasrngl
    favenfltee
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5ixaB (B:)
    mdrktrlsepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvsk
    itfnssclyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapd
    fnmefssacvhgqdivresensavhvdldfgvvadllkwigphtrvkrnvkkapcptgtv
    qilvhagppaikfiltngseleftsnnrvsfhgvknmrinvqlknfyqtllncavtklpc
    tlrivtehdtllyvasrnglfavenflteepfqrgdpfdknyvgnsgksr
    

    Sequence, based on observed residues (ATOM records): (download)
    >5ixaB (B:)
    sepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvskitfnssc
    lyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapdfnmefss
    acvhgqdivresensavhvdldfgvvadllkwigptgtvqilvhagppaikfiltngsel
    eftsnnrvsfhgvknmrinvqlknfyqtllncavtklpctlrivtehdtllyvasrnglf
    avenflteepf