PDB entry 5iwd

View 5iwd on RCSB PDB site
Description: HCMV DNA polymerase subunit UL44 complex with a small molecule
Class: replication/replication inhibitor
Keywords: covalent inhibitor, HCMV Pol accessory subunit, protein-protein interaction, human cytomegalovirus, DNA polymerase, processivity factor, REPLICATION-REPLICATION INHIBITOR complex
Deposited on 2016-03-22, released 2016-11-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: XRAY
Resolution: 2.56 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA polymerase processivity factor
    Species: Human cytomegalovirus (strain AD169) [TaxId:10360]
    Gene: UL44
    Database cross-references and differences (RAF-indexed):
    • Uniprot P16790
      • conflict (4)
      • see remark 999 (204)
    Domains in SCOPe 2.08: d5iwda1, d5iwda2
  • Heterogens: 6EV, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5iwdA (A:)
    mdrkdrlsepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvsk
    itfnssclyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapd
    fnmefssacvhgqdivresensavhvdldfgvvadllkwigphtrvkrnvkkapcptgtv
    qilvhagppaikfiltngseleftsnnrvsfhgvknmrinvqlknfyqtllncavtklpc
    tlrivtehdtllyvasrnglfavenflteepfqrgdpfdknyvgnsgksr
    

    Sequence, based on observed residues (ATOM records): (download)
    >5iwdA (A:)
    rkdrlsepptlalrlkpyktaiqqlrsviralkenttvtflptpslilqtvrshcvskit
    fnssclyitdksfqpktinnstpllgnfmyltsskdltkfyvqdisdlsakismcapdfn
    mefssacvhgqdivresensavhvdldfgvvadllkwigpptgtvqilvhagppaikfil
    tngseleftsnnrvsfhgvknmrinvqlknfyqtllncavtklpctlrivtehdtllyva
    srnglfavenflteepfqrgd