SCOPe 2.08: Structural Classification of Proteins

PDB entry 5hzu

View 5hzu on RCSB PDB site
Description: Crystal structure of Dronpa-Ni2+
Class: luminescent protein
Keywords: Fluorescent Protein, LUMINESCENT PROTEIN
Deposited on 2016-02-03, released 2017-03-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-11-28, with a file datestamp of 2018-11-23.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6
  - chromophore (60)
Domains in SCOPe 2.08: d5hzua_
Chain 'B':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6 (0-216)
  - chromophore (60)
Domains in SCOPe 2.08: d5hzub_
Chain 'C':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6
  - chromophore (60)
Domains in SCOPe 2.08: d5hzuc_
Chain 'D':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6
  - chromophore (60)
Domains in SCOPe 2.08: d5hzud_
Chain 'E':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6 (Start-216)
  - chromophore (60)
Domains in SCOPe 2.08: d5hzue_
Chain 'F':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6 (0-End)
  - chromophore (60)
Domains in SCOPe 2.08: d5hzuf_
Chain 'G':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6
  - chromophore (60)
Domains in SCOPe 2.08: d5hzug_
Chain 'H':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6 (Start-216)
  - chromophore (60)
Domains in SCOPe 2.08: d5hzuh_
Chain 'I':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6
  - chromophore (60)
Domains in SCOPe 2.08: d5hzui_
Chain 'J':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6 (0-End)
  - chromophore (60)
Domains in SCOPe 2.08: d5hzuj_
Chain 'K':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6
  - chromophore (60)
Domains in SCOPe 2.08: d5hzuk_
Chain 'L':
Compound: Fluorescent protein Dronpa
Species: Echinophyllia sp. SC22 [TaxId:301887]
Gene: Dronpa
Database cross-references and differences (RAF-indexed):
- Uniprot Q5TLG6 (Start-216)
  - chromophore (60)
Domains in SCOPe 2.08: d5hzul_
Heterogens: NI, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>5hzuA (A:)
svikpdmkiklrmegavnghpfaiegvglgkpfegkqsmdlkvkeggplpfaydilttvf
sygnrvfakypenivdyfkqsfpegyswersmnyedggicnatnditldgdcyiyeirfd
gvnfpangpvmqkrtvkwepsteklyvrdgvlkgdvnmalsleggghyrcdfkttykakk
vvqlpdyhfvdhhieikshdkdysnvnlhehaeahse