PDB entry 5huk

View 5huk on RCSB PDB site
Description: The crystal structure of neuraminidase from A/Northern pintail/Washington/40964/2014 influenza virus
Class: viral protein
Keywords: Neuraminidase, influenza virus, H5Nx, VIRAL PROTEIN
Deposited on 2016-01-27, released 2016-04-13
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-04-13, with a file datestamp of 2016-04-08.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Neuraminidase
    Species: Influenza A virus (A/Northern pintail/Washington/40964/2014(H5N2)) [TaxId:1589662]
    Gene: NA
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Neuraminidase
    Species: Influenza A virus (A/Northern pintail/Washington/40964/2014(H5N2)) [TaxId:1589662]
    Gene: NA
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Neuraminidase
    Species: Influenza A virus (A/Northern pintail/Washington/40964/2014(H5N2)) [TaxId:1589662]
    Gene: NA
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Neuraminidase
    Species: Influenza A virus (A/Northern pintail/Washington/40964/2014(H5N2)) [TaxId:1589662]
    Gene: NA
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA, NAG, BMA, MAN, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.06, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >5hukA (A:)
slvprgsgdsgspgaeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspg
kcyqfalgqgttlnnkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgk
awlhvcvtgddrnatasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsas
gradtrilfikegkivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinm
adysidssyvcsglvgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtis
edsrsgyetfrvtdgwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyveli
rgrpqetrvwwtsnsivvfcgtsgtygtgswpdganinfmpi

    Sequence, based on observed residues (ATOM records):
    >5hukA (A:)
aeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspgkcyqfalgqgttln
nkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgkawlhvcvtgddrna
tasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsasgradtrilfikegk
ivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinmadysidssyvcsgl
vgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtisedsrsgyetfrvtd
gwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyvelirgrpqetrvwwtsn
sivvfcgtsgtygtgswpdganinfmpi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >5hukB (B:)
slvprgsgdsgspgaeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspg
kcyqfalgqgttlnnkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgk
awlhvcvtgddrnatasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsas
gradtrilfikegkivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinm
adysidssyvcsglvgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtis
edsrsgyetfrvtdgwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyveli
rgrpqetrvwwtsnsivvfcgtsgtygtgswpdganinfmpi

    Sequence, based on observed residues (ATOM records):
    >5hukB (B:)
aeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspgkcyqfalgqgttln
nkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgkawlhvcvtgddrna
tasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsasgradtrilfikegk
ivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinmadysidssyvcsgl
vgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtisedsrsgyetfrvtd
gwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyvelirgrpqetrvwwtsn
sivvfcgtsgtygtgswpdganinfmpi

  • Chain 'C':
    Sequence, based on SEQRES records:
    >5hukC (C:)
slvprgsgdsgspgaeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspg
kcyqfalgqgttlnnkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgk
awlhvcvtgddrnatasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsas
gradtrilfikegkivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinm
adysidssyvcsglvgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtis
edsrsgyetfrvtdgwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyveli
rgrpqetrvwwtsnsivvfcgtsgtygtgswpdganinfmpi

    Sequence, based on observed residues (ATOM records):
    >5hukC (C:)
aeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspgkcyqfalgqgttln
nkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgkawlhvcvtgddrna
tasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsasgradtrilfikegk
ivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinmadysidssyvcsgl
vgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtisedsrsgyetfrvtd
gwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyvelirgrpqetrvwwtsn
sivvfcgtsgtygtgswpdganinfmpi

  • Chain 'D':
    Sequence, based on SEQRES records:
    >5hukD (D:)
slvprgsgdsgspgaeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspg
kcyqfalgqgttlnnkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgk
awlhvcvtgddrnatasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsas
gradtrilfikegkivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinm
adysidssyvcsglvgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtis
edsrsgyetfrvtdgwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyveli
rgrpqetrvwwtsnsivvfcgtsgtygtgswpdganinfmpi

    Sequence, based on observed residues (ATOM records):
    >5hukD (D:)
aeyrnwskpqcqitgfapfskdnsirlsaggdiwvtrepyvscspgkcyqfalgqgttln
nkhsngtihdriphrtllmselgvpfhlgtkqvciawsssschdgkawlhvcvtgddrna
tasfiydgmladsigswsqnilrtqesecvcingtctvvmtdgsasgradtrilfikegk
ivhisplsgsaqhieecscyprypdvrcvcrdnwkgsnrpvidinmadysidssyvcsgl
vgdtprnddsssssncrdpnnergnpgvkgwafdngndvwmgrtisedsrsgyetfrvtd
gwttansksqvnrqiivdnnnwsgysgifsvegkscinrcfyvelirgrpqetrvwwtsn
sivvfcgtsgtygtgswpdganinfmpi