PDB entry 5hmn

View 5hmn on RCSB PDB site
Description: Crystal structure of an aminoglycoside acetyltransferase HMB0005 from an uncultured soil metagenomic sample, unknown active site density modeled as polyethylene glycol
Class: transferase
Keywords: GNAT FOLD, GCN5-N-ACETYLTRANSFERASE FOLD, ACETYLTRANSFERASE, AMINOGLYCOSIDE, ANTIBIOTIC RESISTANCE, METAGENOME, SOIL, COENZYME A, STRUCTURAL GENOMICS, Center for Structural Genomics of Infectious Diseases, CSGID, TRANSFERASE
Deposited on 2016-01-16, released 2016-02-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 2.02 Å
R-factor: N/A
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: aac3-I
    Species: Uncultured bacterium [TaxId:77133]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hmna_
  • Chain 'B':
    Compound: aac3-I
    Species: Uncultured bacterium [TaxId:77133]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hmnb1, d5hmnb2
  • Chain 'C':
    Compound: aac3-I
    Species: Uncultured bacterium [TaxId:77133]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hmnc_
  • Chain 'D':
    Compound: aac3-I
    Species: Uncultured bacterium [TaxId:77133]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hmnd1, d5hmnd2
  • Chain 'E':
    Compound: aac3-I
    Species: Uncultured bacterium [TaxId:77133]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hmne_
  • Chain 'F':
    Compound: aac3-I
    Species: Uncultured bacterium [TaxId:77133]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hmnf_
  • Heterogens: COA, PG4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hmnA (A:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvsqnnvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hmnA (A:)
sldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaaleyg
eivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvifvq
adtaiedepaialysklgvreevlhfdipvs

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >5hmnB (B:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvsqnnvd

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5hmnC (C:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvsqnnvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hmnC (C:)
msldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaaley
geivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvifv
qadtaiedepaialysklgvreevlhfdipvs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5hmnD (D:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvsqnnvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hmnD (D:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5hmnE (E:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvsqnnvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hmnE (E:)
sldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaaleyg
eivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvifvq
adtaiedepaialysklgvreevlhfdipvs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5hmnF (F:)
qsmsldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaal
eygeivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvi
fvqadtaiedepaialysklgvreevlhfdipvsqnnvd

    Sequence, based on observed residues (ATOM records): (download) 
    >5hmnF (F:)
sldvhqlspnevalmetllatfgeafndmetytgnrprgaysrrllesdyfialaaleyg
eivgglaayelkkfeqerseiyiydlavakahrrrgiatalieklkelgaargayvifvq
adtaiedepaialysklgvreevlhfdipvs