PDB entry 5hk0

View 5hk0 on RCSB PDB site
Description: Crystal structure of M. tuberculosis MazF-mt3 (Rv1991c) in complex with RNA
Class: hydrolase/rna
Keywords: toxin-antitoxin system, MazF, hydrolase-rna complex
Deposited on 2016-01-13, released 2017-01-18
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-01-18, with a file datestamp of 2017-01-13.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Endoribonuclease MazF6
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: mazF6, mazF-mt3, Rv1991c, MTCY39.28
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk0a_
  • Chain 'B':
    Compound: Endoribonuclease MazF6
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: mazF6, mazF-mt3, Rv1991c, MTCY39.28
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk0b_
  • Chain 'C':
    Compound: Endoribonuclease MazF6
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: mazF6, mazF-mt3, Rv1991c, MTCY39.28
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk0c_
  • Chain 'D':
    Compound: Endoribonuclease MazF6
    Species: Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) [TaxId:83332]
    Gene: mazF6, mazF-mt3, Rv1991c, MTCY39.28
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hk0d_
  • Chain 'E':
    Compound: RNA (5'-r(*ap*gp*up*c)-d(p*u)-r(p*cp*cp*up*up*up*c)-3')
    Species: Mycobacterium tuberculosis [TaxId:1773]
  • Chain 'F':
    Compound: RNA (5'-r(*ap*gp*up*c)-d(p*u)-r(p*cp*cp*up*up*up*c)-3')
    Species: Mycobacterium tuberculosis [TaxId:1773]
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hk0A (A:)
mvisraeiywadlgppsgsqpakrrpvlviqsdpynasrlatviaavitsntalaampgn
vflpatttrlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk0A (A:)
mvisraeiywadlgppakrrpvlviqsdpynasrlatviaavitsntalaampgnvflpa
tttrlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5hk0B (B:)
mvisraeiywadlgppsgsqpakrrpvlviqsdpynasrlatviaavitsntalaampgn
vflpatttrlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk0B (B:)
mvisraeiywadlpakrrpvlviqsdpynasrlatviaavitsntalaampgnvflpatt
trlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5hk0C (C:)
mvisraeiywadlgppsgsqpakrrpvlviqsdpynasrlatviaavitsntalaampgn
vflpatttrlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk0C (C:)
visraeiywadlgpppakrrpvlviqsdpynasrlatviaavitsntalaampgnvflpa
tttrlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5hk0D (D:)
mvisraeiywadlgppsgsqpakrrpvlviqsdpynasrlatviaavitsntalaampgn
vflpatttrlprdsvvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

    Sequence, based on observed residues (ATOM records): (download) 
    >5hk0D (D:)
raeiywadlkrrpvlviqsdpynasrlatviaavitsntalaampgnvflpatttrlprd
svvnvtaivtlnktdltdrvgevpaslmhevdrglrrvldl

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.