PDB entry 5hdm

View 5hdm on RCSB PDB site
Description: Crystal structure of Arabidopsis thaliana glutamate-1-semialdehyde-2,1-aminomutase
Class: isomerase
Keywords: Arabidopsis thaliana, glutamate-1-semialdehyde-2, 1-aminomutase, PMP, PLP, ISOMERASE
Deposited on 2016-01-05, released 2016-06-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-01-01, with a file datestamp of 2019-12-27.
Experiment type: XRAY
Resolution: 1.25 Å
R-factor: N/A
AEROSPACI score: 0.62 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GSA1, HEML1, At5g63570, MBK5.3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hdma_
  • Chain 'B':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase 1, chloroplastic
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: GSA1, HEML1, At5g63570, MBK5.3
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5hdmb_
  • Heterogens: PMP, PLP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5hdmA (A:)
vdekkksfslqkseeafnaaknlmpggvnspvrafksvggqpvlidsvkgskmwdidgne
yidyvgswgpaiighaddevlaalaetmkkgtsfgapcllenvlaemvisavpsiemvrf
vnsgteacmgvlrlaraftnkekfikfegcyhghanaflvkagsgvatlglpdspgvpka
atsdtltapyndleaveklfaahkgeisavilepvvgnsgfipptpefinglrqltkdng
vllifdevmtgfrlayggaqeyfgitpdlttlgkiiggglpvgayggrrdimemvapagp
myqagtlsgnplamtagihtlkrlkqagtyeyldkitkeltngileagkktghpmcggyi
sgmfgfffaegpvynfadskksdtekfgrffrgmleegvyfapsqfeagftslahtpedi
qltiaaaervlsri

    Sequence, based on observed residues (ATOM records): (download) 
    >5hdmA (A:)
sfslqkseeafnaaknlmpggvnspvrafksvggqpvlidsvkgskmwdidgneyidyvg
swgpaiighaddevlaalaetmkkgtsfgapcllenvlaemvisavpsiemvrfvnsgte
acmgvlrlaraftnkekfikfegcyhghanaflvkagsgvatlglpdspgvpkaatsdtl
tapyndleaveklfaahkgeisavilepvvgnsgfipptpefinglrqltkdngvllifd
evmtgfrlayggaqeyfgitpdlttlgkiiggglpvgayggrrdimemvapagpmyqagt
lsgnplamtagihtlkrlkqagtyeyldkitkeltngileagkktghpmcggyisgmfgf
ffaegpvynfadskksdtekfgrffrgmleegvyfapsqfeagftslahtpediqltiaa
aervlsri

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5hdmB (B:)
vdekkksfslqkseeafnaaknlmpggvnspvrafksvggqpvlidsvkgskmwdidgne
yidyvgswgpaiighaddevlaalaetmkkgtsfgapcllenvlaemvisavpsiemvrf
vnsgteacmgvlrlaraftnkekfikfegcyhghanaflvkagsgvatlglpdspgvpka
atsdtltapyndleaveklfaahkgeisavilepvvgnsgfipptpefinglrqltkdng
vllifdevmtgfrlayggaqeyfgitpdlttlgkiiggglpvgayggrrdimemvapagp
myqagtlsgnplamtagihtlkrlkqagtyeyldkitkeltngileagkktghpmcggyi
sgmfgfffaegpvynfadskksdtekfgrffrgmleegvyfapsqfeagftslahtpedi
qltiaaaervlsri

    Sequence, based on observed residues (ATOM records): (download) 
    >5hdmB (B:)
sfslqkseeafnaaknlmpggvnspvrafksvggqpvlidsvkgskmwdidgneyidyvg
swgpaiighaddevlaalaetmkkgtsfgapcllenvlaemvisavpsiemvrfvnsgte
acmgvlrlaraftnkekfikfegcyhghanaflvkagsgvatlglpdspgvpkaatsdtl
tapyndleaveklfaahkgeisavilepvvgnsgfipptpefinglrqltkdngvllifd
evmtgfrlayggaqeyfgitpdlttlgkiiggglpvgayggrrdimemvapagpmyqagt
lsgnplamtagihtlkrlkqagtyeyldkitkeltngileagkktghpmcggyisgmfgf
ffaegpvynfadskksdtekfgrffrgmleegvyfapsqfeagftslahtpediqltiaa
aervlsri