PDB entry 5grm
View 5grm on RCSB PDB site
Description: Crystal structure of rat STING in complex with cyclic GMP-AMP with 2'5'and 3'5'phosphodiester linkage(2'3'-cGAMP)
Class: immune system
Keywords: Rat STING, 2'3'-cGAMP, IMMUNE SYSTEM
Deposited on
2016-08-11, released
2017-10-25
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-10-25, with a file datestamp of
2017-10-20.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Stimulator of interferon genes protein
Species: Rattus norvegicus [TaxId:10116]
Gene: Tmem173, Sting
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5grma1, d5grma2 - Chain 'B':
Compound: Stimulator of interferon genes protein
Species: Rattus norvegicus [TaxId:10116]
Gene: Tmem173, Sting
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5grmb1, d5grmb2 - Heterogens: 1SY, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5grmA (A:)
mgsshhhhhhssgenlyfqgshmvahglawsyyigylklilpglqarirmfnqlhnnmls
gagsrrlyilfpldcgvpddlsvadpnirfrdmlpqqntdragvknraysnsvyelleng
qpagacileyatplqtlfamsqdgkagfsredrleqaklfcrtleeiladvpesrnhcrl
ivyqeseegnsfslsqevlrhirqeekeev
Sequence, based on observed residues (ATOM records): (download)
>5grmA (A:)
yfqgshmvahglawsyyigylklilpglqarirmfnqlhnnmlsgagsrrlyilfpldcg
vpddlsvadpnirfrdmlpqqntdragvknraysnsvyellengqpagacileyatplqt
lfamsqdgkagfsredrleqaklfcrtleeiladvpesrnhcrlivyqeseegnsfslsq
evlrhirq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5grmB (B:)
mgsshhhhhhssgenlyfqgshmvahglawsyyigylklilpglqarirmfnqlhnnmls
gagsrrlyilfpldcgvpddlsvadpnirfrdmlpqqntdragvknraysnsvyelleng
qpagacileyatplqtlfamsqdgkagfsredrleqaklfcrtleeiladvpesrnhcrl
ivyqeseegnsfslsqevlrhirqeekeev
Sequence, based on observed residues (ATOM records): (download)
>5grmB (B:)
shmvahglawsyyigylklilpglqarirmfnqlhnnmlsgagsrrlyilfpldcgvpdd
lsvadpnirfrdmlpqqntdragvknraysnsvyellengqpagacileyatplqtlfam
sqdgkagfsredrleqaklfcrtleeiladvpesrnhcrlivyqeseegnsfslsqevlr
hirqeekeev