PDB entry 5g2m

View 5g2m on RCSB PDB site
Description: Crystal structure of NagZ from Pseudomonas aeruginosa in complex with N-acetylglucosamine
Class: hydrolase
Keywords: hydrolase, cell-wall recycling, antibiotic resistance, glycoside hydrolase, beta-hexosaminidase, peptidoglycan
Deposited on 2016-04-09, released 2017-05-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2017-05-24, with a file datestamp of 2017-05-19.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-hexosaminidase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HZK0 (20-351)
      • expression tag (19)
    Domains in SCOPe 2.06: d5g2ma1, d5g2ma2
  • Chain 'B':
    Compound: Beta-hexosaminidase
    Species: PSEUDOMONAS AERUGINOSA [TaxId:208964]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9HZK0 (20-351)
      • expression tag (19)
    Domains in SCOPe 2.06: d5g2mb1, d5g2mb2
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5g2mA (A:)
    mgsshhhhhhssglvprgshmqgslmldiggtwltaedrqilrhpevggliifarniehp
    aqvrelcaairairpdlllavdqeggrvqrlrqgfvrlpamraiadnpnaeelaehcgwl
    matevqavgldlsfapvldldhqrsavvgsrafegdperaallagafirgmhaagmaatg
    khfpghgwaeadshvaipedarsleeirrsdlvpfarlagqldalmpahviypqvdpqpa
    gfsrrwlqeilrgelkfdgvifsddlsmagahvvgdaasrieaalaagcdmglvcndras
    aelalaalqrlkvtppsrlqrmrgkgyantdyrqqprwlealsalraaqlid
    

    Sequence, based on observed residues (ATOM records): (download)
    >5g2mA (A:)
    hmqgslmldiggtwltaedrqilrhpevggliifarniehpaqvrelcaairairpdlll
    avdqeggrvqrlrqgfvrlpamraiadnpnaeelaehcgwlmatevqavgldlsfapvld
    ldhqrsavvgsrafegdperaallagafirgmhaagmaatgkhfpghgwaehvaipedar
    sleeirrsdlvpfarlagqldalmpahviypqvdpqpagfsrrwlqeilrgelkfdgvif
    sddlsmagahvvgdaasrieaalaagcdmglvcndrasaelalaalqrlkvtppsrlqrm
    rgkgyantdyrqqprwlealsalraaqlid
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5g2mB (B:)
    mgsshhhhhhssglvprgshmqgslmldiggtwltaedrqilrhpevggliifarniehp
    aqvrelcaairairpdlllavdqeggrvqrlrqgfvrlpamraiadnpnaeelaehcgwl
    matevqavgldlsfapvldldhqrsavvgsrafegdperaallagafirgmhaagmaatg
    khfpghgwaeadshvaipedarsleeirrsdlvpfarlagqldalmpahviypqvdpqpa
    gfsrrwlqeilrgelkfdgvifsddlsmagahvvgdaasrieaalaagcdmglvcndras
    aelalaalqrlkvtppsrlqrmrgkgyantdyrqqprwlealsalraaqlid
    

    Sequence, based on observed residues (ATOM records): (download)
    >5g2mB (B:)
    hmqgslmldiggtwltaedrqilrhpevggliifarniehpaqvrelcaairairpdlll
    avdqeggrvqrlrqgfvrlpamraiadnpnaeelaehcgwlmatevqavgldlsfapvld
    ldhqrsavvgsrafegdperaallagafirgmhaagmaatgkhfpghgwahvaipedars
    leeirrsdlvpfarlagqldalmpahviypqvdpqpagfsrrwlqeilrgelkfdgvifs
    ddlsmagahvvgdaasrieaalaagcdmglvcndrasaelalaalqrlkvtppsrlqrmr
    gkgyantdyrqqprwlealsalraaqlid