PDB entry 5e8e
View 5e8e on RCSB PDB site
Description: Crystal structure of thrombin bound to an exosite 1-specific IgA Fab
Class: immune system/hydrolase
Keywords: immune system-hydrolase complex, immune system, inhibitor
Deposited on
2015-10-14, released
2015-10-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-06-29.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: iga fab light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5e8ea1, d5e8ea2 - Chain 'B':
Compound: iga fab heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5e8eb1, d5e8eb2 - Chain 'H':
Compound: Thrombin heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Thrombin light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Heterogens: PEG, PO4, CIT, NA, 0G6, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>5e8eA (A:)
eivltqspatlslspgeratlscrasqnvssflawyqhkpgqaprlliydassratdipi
rfsgsgsgtdftltisglepedfavyycqqrrswppltfgggtkveikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekqkvyacevthqglsspvtksflrgec
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5e8eB (B:)
evqliqsgsavkkpgasvrvsckvsgytlteaaihwvrqapgkglewmggldpqdgetvy
aqqfkgrvtmtedrstdtaymevnnlrsedtatyycttgdfsefepfsmdyfhfwgqgtv
vtvasstpvspkvfplslcstqpdgnvviaclvqgffpqeplsvtwsesgqgvtarnfpp
sqdasgdlyttssqltlpatqclagksvtchvkhytnpsqdvtvpcpvp
- Chain 'H':
No sequence available.
- Chain 'L':
No sequence available.