PDB entry 5e2f

View 5e2f on RCSB PDB site
Description: Crystal Structure of Beta-lactamase class D from Bacillus subtilis
Class: hydrolase
Keywords: beta lactamase, Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, HYDROLASE
Deposited on 2015-10-01, released 2015-10-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-10-14, with a file datestamp of 2015-10-09.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: N/A
AEROSPACI score: 0.59 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-lactamase YbxI
    Species: Bacillus subtilis (strain 168) [TaxId:224308]
    Gene: ybxI, ybdS, BSU02090
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5e2fa_
  • Chain 'B':
    Compound: Beta-lactamase YbxI
    Species: Bacillus subtilis (strain 168) [TaxId:224308]
    Gene: ybxI, ybdS, BSU02090
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5e2fb_
  • Heterogens: CA, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5e2fA (A:)
snamkkwiyvvlvlsiagiggfsvhaassahekhlnvskmnvddefkdtdgtfilhdlqk
dqtfvynrkranqrqtpqstfkvvnaliglqvkavrdeydvkrwdgvkrefeswnrdhtl
gsamresaiwyyqalardigeermktwlhtlsygnedisggidqfwlqssltispleqet
fleklakeelpfdkpvmkivkrmmiqeegdhytlygktgtrltdmglgwfvgfiktehgs
yvfvtnvddsgtkaknitvdilkkyglits

    Sequence, based on observed residues (ATOM records): (download) 
    >5e2fA (A:)
hlnvskmnvddefkdtdgtfilhdlqkdqtfvynrkranqrqtpqstfkvvnaliglqvk
avrdeydvkrwdgvkrefeswnrdhtlgsamresaiwyyqalardigeermktwlhtlsy
gnedisggidqfwlqssltispleqetfleklakeelpfdkpvmkivkrmmiqeegdhyt
lygktgtrltdmglgwfvgfiktehgsyvfvtnvddsgtkaknitvdilkkyglits

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5e2fB (B:)
snamkkwiyvvlvlsiagiggfsvhaassahekhlnvskmnvddefkdtdgtfilhdlqk
dqtfvynrkranqrqtpqstfkvvnaliglqvkavrdeydvkrwdgvkrefeswnrdhtl
gsamresaiwyyqalardigeermktwlhtlsygnedisggidqfwlqssltispleqet
fleklakeelpfdkpvmkivkrmmiqeegdhytlygktgtrltdmglgwfvgfiktehgs
yvfvtnvddsgtkaknitvdilkkyglits

    Sequence, based on observed residues (ATOM records): (download) 
    >5e2fB (B:)
hlnvskmnvddefkdtdgtfilhdlqkdqtfvynrkranqrqtpqstfkvvnaliglqvk
avrdeydvkrwdgvkrefeswnrdhtlgsamresaiwyyqalardigeermktwlhtlsy
gnedisggidqfwlqssltispleqetfleklakeelpfdkpvmkivkrmmiqeegdhyt
lygktgtrltdmglgwfvgfiktehgsyvfvtnvddsgtkaknitvdilkkyglits