PDB entry 5dt1

View 5dt1 on RCSB PDB site
Description: Crystal structure of human Fab CAP256-VRC26.25, a potent V1V2-directed HIV-1 broadly neutralizing antibody
Class: immune system
Keywords: VRC26, CAP256, V1V2, HIV-1, Env, Envelope, Broadly Neutralizing, superinfection, IMMUNE SYSTEM
Deposited on 2015-09-17, released 2015-10-21
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-10-21, with a file datestamp of 2015-10-16.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: Fab Heavy chain of broadly neutralizing antibody VRC26.25
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DT1
  • Chain 'L':
    Compound: Fab Light chain of broadly neutralizing antibody VRC26.25
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 5DT1 (0-End)
    Domains in SCOPe 2.05: d5dt1l1, d5dt1l2
  • Heterogens: NAG, BMA, HOH

PDB Chain Sequences:

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >5dt1L (L:)
qsvltqppsvsaapgqkvtiscsgntsnignnfvswyqqrpgrapqlliyetdkrpsgip
drfsasksgtsgtlaitglqtgdeadyycatwaaslssarvfgtgtkvivlvqpkanptv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >5dt1L (L:)
qsvltqppsvsaapgqkvtiscsgntsnignnfvswyqqrpgrapqlliyetdkrpsgip
drfsasksgtsgtlaitglqtgdeadyycatwaaslssarvfgtgtkvivlvqpkanptv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvapte