PDB entry 5cvm

View 5cvm on RCSB PDB site
Description: USP46~ubiquitin BEA covalent complex
Class: hydrolase/signaling protein
Keywords: USP46 Ubiquitin covalent complex, DUB, deubiquitinase, HYDROLASE-SIGNALING PROTEIN complex
Deposited on 2015-07-27, released 2015-10-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-11-11, with a file datestamp of 2015-11-06.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin carboxyl-terminal hydrolase 46
    Species: Homo sapiens [TaxId:9606]
    Gene: USP46
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cvma_
  • Chain 'B':
    Compound: Polyubiquitin-B
    Species: Homo sapiens [TaxId:9606]
    Gene: UBB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0CG47 (20-78)
      • expression tag (17-19)
      • expression tag (79-95)
    Domains in SCOPe 2.08: d5cvmb1, d5cvmb2, d5cvmb3
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5cvmA (A:)
mhhhhhhgenlyfqgspeqfpinehyfglvnfgntcycnsvlqalyfcrpfrenvlayka
qqkkkenlltcladlfhsiatqkkkvgvippkkfisrlrkendlfdnymqqdaheflnyl
lntiadilqeekkqekqngklkngnmnepaennkpeltwvheifqgtltnetrclncetv
sskdedfldlsvdveqntsithclrdfsntetlcseqkyycetccskqeaqkrmrvkklp
milalhlkrfkymeqlhrytklsyrvvfplelrlfntssdavnldrmydlvavvvhcgsg
pnrghyitivkshgfwllfdddivekidaqaieefygltsdisknsesgyilfyqsre

    Sequence, based on observed residues (ATOM records): (download) 
    >5cvmA (A:)
hyfglvnfgntcycnsvlqalyfcrpfrenvlaykaqqkkkenlltcladlfhsiatqkk
kvgvippkkfisrlrkendlfdnymqqdaheflnyllntiadilqeekkqeltwvheifq
gtltnetrclncetvsskdedfldlsvdveqntsithclrdfsntetlcseqkyycetcc
skqeaqkrmrvkklpmilalhlkrfkymeqlhrytklsyrvvfplelrlfntsnldrmyd
lvavvvhcgsgpnrghyitivkshgfwllfdddivekidaqaieefygltsdisknsesg
yilfyqsr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5cvmB (B:)
mgsshhhhhhssglvprgshmqifvktltgktitlevepsdtienvkakiqdkegippdq
qrlifagkqledgrtlsdyniqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >5cvmB (B:)
gshmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtls
dyniqkestlhlvlrlrgg