PDB entry 5cpq

View 5cpq on RCSB PDB site
Description: Disproportionating enzyme 1 from Arabidopsis - apo form
Class: transferase
Keywords: disproportionating enzyme 1, 4-alpha-glucanotransferase, Glycoside Hydrolase Family 77, starch degradation, transferase
Deposited on 2015-07-21, released 2015-11-04
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-08-30, with a file datestamp of 2017-08-25.
Experiment type: XRAY
Resolution: 2.13 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: DPE1, At5g64860, MXK3.9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5cpqa_
  • Chain 'B':
    Compound: 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: DPE1, At5g64860, MXK3.9
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5cpqb_
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >5cpqA (A:)
    mhhhhhhgkpipnpllgldstenlyfqgidpftmevvssnstclssisvgedfpseyeqw
    lpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgcsvwqvlplvppdeg
    gspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqtanklksplitkaak
    rlidgngelksklldfrndpsiscwledaayfaaidntlnayswfewpeplknrhlsale
    aiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyvgyhsadvwankkhf
    llnkkgfpllvsgvppdlfsetgqlwgsplydwkamesdqyswwvnrirraqdlydecri
    dhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiiaedlgvitkdvvel
    rksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirgwwdtldqeekska
    mkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntpatevgnwgwrips
    stsfdnletesdrlrdllslygrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5cpqA (A:)
    isvgedfpseyeqwlpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgc
    svwqvlplvppdeggspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqt
    anklksplitkaakrlidgngelksklldfrndpsiscwledaayfaaidntlnayswfe
    wpeplknrhlsaleaiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyv
    gyhsadvwankkhfllnkkgfpllvsgvppgqlwgsplydwkamesdqyswwvnrirraq
    dlydecridhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiiaedlgv
    itkdvvelrksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirgwwdtl
    dqeekskamkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntpatevg
    nwgwripsstsfdnletesdrlrdllslygrl
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >5cpqB (B:)
    mhhhhhhgkpipnpllgldstenlyfqgidpftmevvssnstclssisvgedfpseyeqw
    lpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgcsvwqvlplvppdeg
    gspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqtanklksplitkaak
    rlidgngelksklldfrndpsiscwledaayfaaidntlnayswfewpeplknrhlsale
    aiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyvgyhsadvwankkhf
    llnkkgfpllvsgvppdlfsetgqlwgsplydwkamesdqyswwvnrirraqdlydecri
    dhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiiaedlgvitkdvvel
    rksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirgwwdtldqeekska
    mkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntpatevgnwgwrips
    stsfdnletesdrlrdllslygrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >5cpqB (B:)
    isvgedfpseyeqwlpvpdpesrrragvllhptsfrgphgigdlgeeafrfidwlhstgc
    svwqvlplvppdeggspyagqdancgntllisldelvkdgllikdelpqpidadsvnyqt
    anklksplitkaakrlidgngelksklldfrndpsiscwledaayfaaidntlnayswfe
    wpeplknrhlsaleaiyesqkefidlfiakqflfqrqwqkvreyarrqgvdimgdmpiyv
    gyhsadvwankkhfllnkkgfpllvsgvppdtgqlwgsplydwkamesdqyswwvnrirr
    aqdlydecridhfrgfagfwavpseakvamvgrwkvgpgkslfdaiskgvgkikiiaedl
    gvitkdvvelrksigapgmavlqfafgggadnphlphnhevnqvvysgthdndtirgwwd
    tldqeekskamkylsiageddiswsviqaafsstaqtaiipmqdilglgssarmntpate
    vgnwgwripsstsfdnletesdrlrdllslygrl