PDB entry 5cnp

View 5cnp on RCSB PDB site
Description: X-ray crystal structure of Spermidine n1-acetyltransferase from Vibrio cholerae.
Class: transferase
Keywords: acetyltransferase, spermidine, spermine, structural genomics, IDP01616, Center for Structural Genomics of Infectious Diseases, CSGID, TRANSFERASE
Deposited on 2015-07-17, released 2015-07-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: XRAY
Resolution: 2.38 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Spermidine N(1)-acetyltransferase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
    Gene: speG, VC_A0947
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KL03 (3-175)
      • expression tag (2)
    Domains in SCOPe 2.08: d5cnpa1, d5cnpa2
  • Chain 'B':
    Compound: Spermidine N(1)-acetyltransferase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
    Gene: speG, VC_A0947
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cnpb_
  • Chain 'C':
    Compound: Spermidine N(1)-acetyltransferase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
    Gene: speG, VC_A0947
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cnpc_
  • Chain 'D':
    Compound: Spermidine N(1)-acetyltransferase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
    Gene: speG, VC_A0947
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KL03 (3-175)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d5cnpd1, d5cnpd2
  • Chain 'E':
    Compound: Spermidine N(1)-acetyltransferase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
    Gene: speG, VC_A0947
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cnpe_
  • Chain 'F':
    Compound: Spermidine N(1)-acetyltransferase
    Species: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [TaxId:243277]
    Gene: speG, VC_A0947
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5cnpf_
  • Heterogens: IPA, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5cnpA (A:)
snamnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerr
fvvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlh
kiylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

    Sequence, based on observed residues (ATOM records): (download) 
    >5cnpA (A:)
amnsqltlralergdlrfihnlnnmsywfeepyesfdeleelynkhihdnaerrfvveda
qknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlhkiylhv
avenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5cnpB (B:)
snamnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerr
fvvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlh
kiylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

    Sequence, based on observed residues (ATOM records): (download) 
    >5cnpB (B:)
nsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerrfvve
daqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlhkiyl
hvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5cnpC (C:)
snamnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerr
fvvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlh
kiylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

    Sequence, based on observed residues (ATOM records): (download) 
    >5cnpC (C:)
mnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerrfvv
edaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlhkiy
lhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5cnpD (D:)
snamnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerr
fvvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlh
kiylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

    Sequence, based on observed residues (ATOM records): (download) 
    >5cnpD (D:)
namnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerrf
vvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlhk
iylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >5cnpE (E:)
snamnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerr
fvvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlh
kiylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

    Sequence, based on observed residues (ATOM records): (download) 
    >5cnpE (E:)
nsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerrfvve
daqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlhkiyl
hvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskyln

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >5cnpF (F:)
snamnsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerr
fvvedaqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlh
kiylhvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskylnrse

    Sequence, based on observed residues (ATOM records): (download) 
    >5cnpF (F:)
nsqltlralergdlrfihnlnnnrnimsywfeepyesfdeleelynkhihdnaerrfvve
daqknliglvelieinyihrsaefqiiiapehqgkgfartlinraldysftilnlhkiyl
hvavenpkavhlyeecgfveeghlveeffingryqdvkrmyilqskyln