PDB entry 5b70

View 5b70 on RCSB PDB site
Description: OxyR2 E204G regulatory domain from Vibrio vulnificus
Class: transcription
Keywords: LysR-type transcription regulator, LTTR, OxyR, H2O2, TRANSCRIPTION
Deposited on 2016-06-02, released 2017-03-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-05-10, with a file datestamp of 2017-05-05.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LysR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A087I947 (Start-218)
      • expression tag (0-2)
      • engineered mutation (121)
    Domains in SCOPe 2.08: d5b70a1, d5b70a2
  • Chain 'B':
    Compound: LysR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A087I947 (3-218)
      • expression tag (0-2)
      • engineered mutation (121)
    Domains in SCOPe 2.08: d5b70b1, d5b70b2
  • Chain 'C':
    Compound: LysR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A087I947 (3-218)
      • expression tag (0-2)
      • engineered mutation (121)
    Domains in SCOPe 2.08: d5b70c1, d5b70c2
  • Chain 'D':
    Compound: LysR family transcriptional regulator
    Species: Vibrio vulnificus [TaxId:672]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A087I947 (3-218)
      • expression tag (0-2)
      • engineered mutation (121)
    Domains in SCOPe 2.08: d5b70d1, d5b70d2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5b70A (A:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell

    Sequence, based on observed residues (ATOM records): (download) 
    >5b70A (A:)
gammqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhgeldvli
lalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghcltehav
sackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvvieppgqqa
yrdiglvwrpsssrsktfnqlaevvsell

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5b70B (B:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell

    Sequence, based on observed residues (ATOM records): (download) 
    >5b70B (B:)
gamelgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhge
ldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghcl
tehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvviep
pgqqayrdiglvwrpsssrsktfnqlaevvsell

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5b70C (C:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell

    Sequence, based on observed residues (ATOM records): (download) 
    >5b70C (C:)
gamesmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhgeldv
lilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghclteh
avsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvvieppgq
qayrdiglvwrpsssrsktfnqlaevvsell

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5b70D (D:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell

    Sequence, based on observed residues (ATOM records): (download) 
    >5b70D (D:)
gamelgssmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhge
ldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghcl
tehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvviep
pgqqayrdiglvwrpsssrsktfnqlaevvsell