PDB entry 5b70
View 5b70 on RCSB PDB site
Description: OxyR2 E204G regulatory domain from Vibrio vulnificus
Class: transcription
Keywords: LysR-type transcription regulator, LTTR, OxyR, H2O2, TRANSCRIPTION
Deposited on
2016-06-02, released
2017-03-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-05-10, with a file datestamp of
2017-05-05.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: LysR family transcriptional regulator
Species: Vibrio vulnificus [TaxId:672]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A087I947 (Start-218)
- expression tag (0-2)
- engineered mutation (121)
Domains in SCOPe 2.08: d5b70a1, d5b70a2 - Chain 'B':
Compound: LysR family transcriptional regulator
Species: Vibrio vulnificus [TaxId:672]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A087I947 (3-218)
- expression tag (0-2)
- engineered mutation (121)
Domains in SCOPe 2.08: d5b70b1, d5b70b2 - Chain 'C':
Compound: LysR family transcriptional regulator
Species: Vibrio vulnificus [TaxId:672]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A087I947 (3-218)
- expression tag (0-2)
- engineered mutation (121)
Domains in SCOPe 2.08: d5b70c1, d5b70c2 - Chain 'D':
Compound: LysR family transcriptional regulator
Species: Vibrio vulnificus [TaxId:672]
Database cross-references and differences (RAF-indexed):
- Uniprot A0A087I947 (3-218)
- expression tag (0-2)
- engineered mutation (121)
Domains in SCOPe 2.08: d5b70d1, d5b70d2 - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5b70A (A:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell
Sequence, based on observed residues (ATOM records): (download)
>5b70A (A:)
gammqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhgeldvli
lalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghcltehav
sackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvvieppgqqa
yrdiglvwrpsssrsktfnqlaevvsell
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5b70B (B:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell
Sequence, based on observed residues (ATOM records): (download)
>5b70B (B:)
gamelgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhge
ldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghcl
tehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvviep
pgqqayrdiglvwrpsssrsktfnqlaevvsell
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5b70C (C:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell
Sequence, based on observed residues (ATOM records): (download)
>5b70C (C:)
gamesmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhgeldv
lilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghclteh
avsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvvieppgq
qayrdiglvwrpsssrsktfnqlaevvsell
- Chain 'D':
Sequence, based on SEQRES records: (download)
>5b70D (D:)
gamelgslcqgdsmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnllta
lrhgeldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvflle
kghcltehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnl
vvieppgqqayrdiglvwrpsssrsktfnqlaevvsell
Sequence, based on observed residues (ATOM records): (download)
>5b70D (D:)
gamelgssmqgqlklgciptiapfllcdlvqeinqrfpqlnlllredtttnlltalrhge
ldvlilalpveidgmesrvvgqdpfkmvisrhqagaikvpikyddlpdesvfllekghcl
tehavsackltdkekinpfsatslhtlvqmvanglgttfipqmaidhglldnqnlvviep
pgqqayrdiglvwrpsssrsktfnqlaevvsell