PDB entry 5b1c
View 5b1c on RCSB PDB site
Description: Crystal structure of DEN4 ED3 mutant with L387I
Class: immune system
Keywords: Hydrophobic core residue, Side-chain rotamers, Point mutation, Immune system
Deposited on
2015-12-02, released
2016-02-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-02-26, with a file datestamp of
2020-02-21.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Envelope protein E
Species: Dengue virus 4 Dominica/814669/1981 [TaxId:408871]
Database cross-references and differences (RAF-indexed):
- Uniprot P09866 (2-End)
- expression tag (1)
- engineered mutation (95)
Domains in SCOPe 2.08: d5b1ca1, d5b1ca2 - Chain 'B':
Compound: Envelope protein E
Species: Dengue virus 4 Dominica/814669/1981 [TaxId:408871]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5b1cb_ - Chain 'C':
Compound: Envelope protein E
Species: Dengue virus 4 Dominica/814669/1981 [TaxId:408871]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5b1cc_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5b1cA (A:)
gsgmsytmcsgkfsidkemaetqhgttvvkvkyegagapckvpieirdvnkekvvgriis
stplaentnsvtnieleppfgdsyivigvgnsaltihwfrkgssigk
Sequence, based on observed residues (ATOM records): (download)
>5b1cA (A:)
sgmsytmcsgkfsidkemaetqhgttvvkvkyegagapckvpieirdvnkekvvgriiss
tplaentnsvtnieleppfgdsyivigvgnsaltihwfrkg
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5b1cB (B:)
gsgmsytmcsgkfsidkemaetqhgttvvkvkyegagapckvpieirdvnkekvvgriis
stplaentnsvtnieleppfgdsyivigvgnsaltihwfrkgssigk
Sequence, based on observed residues (ATOM records): (download)
>5b1cB (B:)
ytmcsgkfsidkemaetqhgttvvkvkyegagapckvpieirdvnkekvvgriisstpla
entnsvtnieleppfgdsyivigvgnsaltihwfrkg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>5b1cC (C:)
gsgmsytmcsgkfsidkemaetqhgttvvkvkyegagapckvpieirdvnkekvvgriis
stplaentnsvtnieleppfgdsyivigvgnsaltihwfrkgssigk
Sequence, based on observed residues (ATOM records): (download)
>5b1cC (C:)
sytmcsgkfsidkemaetqhgttvvkvkyegagapckvpieirdvnkekvvgriisstpl
aentnsvtnieleppfgdsyivigvgnsaltihwfrkg