PDB entry 5aiu
View 5aiu on RCSB PDB site
Description: A complex of RNF4-RING domain, Ubc13-Ub (isopeptide crosslink)
Class: ligase/signaling protein
Keywords: ligase-signaling protein complex, complex, fusion protein
Deposited on
2015-02-17, released
2015-07-08
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-08-19, with a file datestamp of
2015-08-14.
Experiment type: XRAY
Resolution: 2.21 Å
R-factor: N/A
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: E3 ubiquitin-protein ligase RNF4
Species: Rattus norvegicus [TaxId:10116]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Ubiquitin-conjugating enzyme E2 N
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot P61088
- engineered mutation (88)
- engineered mutation (93)
Domains in SCOPe 2.06: d5aiub_ - Chain 'C':
Compound: Polyubiquitin-C
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5aiuc_ - Chain 'E':
Compound: Ubiquitin-conjugating enzyme E2 N
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Uniprot P61088
- engineered mutation (88)
- engineered mutation (93)
Domains in SCOPe 2.06: d5aiue_ - Chain 'F':
Compound: Polyubiquitin-C
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d5aiuf_ - Heterogens: ZN, EDO, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>5aiuB (B:)
gamaglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelfl
peeypmaapkvrfmtkiyhpnvdklgrikldiladkwspalqirtvllsiqallsapnpd
dplandvaeqwktneaqaietarawtrlyamnni
Sequence, based on observed residues (ATOM records): (download)
>5aiuB (B:)
aglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpee
ypmaapkvrfmtkiyhpnvdklgrikldiladkwspalqirtvllsiqallsapnpddpl
andvaeqwktneaqaietarawtrlyamnn
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>5aiuC (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
- Chain 'E':
Sequence, based on SEQRES records: (download)
>5aiuE (E:)
gamaglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelfl
peeypmaapkvrfmtkiyhpnvdklgrikldiladkwspalqirtvllsiqallsapnpd
dplandvaeqwktneaqaietarawtrlyamnni
Sequence, based on observed residues (ATOM records): (download)
>5aiuE (E:)
aglprriiketqrllaepvpgikaepdesnaryfhvviagpqdspfeggtfklelflpee
ypmaapkvrfmtkiyhpnvdklgrikldiladkwspalqirtvllsiqallsapnpddpl
andvaeqwktneaqaietarawtrlyamnn
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>5aiuF (F:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg